RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 MAFGO15525 162 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 TUBBP07437 444 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 RHOXF2BP0C7M4 288 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 C10orf76Q5T2E6 689 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 PLA2G4FQ68DD2 849 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 NFRKBQ6P4R8 1299 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 SLC30A5Q8TAD4 765 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 CAPZA3Q96KX2 299 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 DRC1Q96MC2 740 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 ACCSQ96QU6 501 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 RHOXF2Q9BQY4 288 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 INTS2Q9H0H0 1204 aaKnown RBP19.2■□□□□ 0.66
SSB-201ENST00000260956 TMEM206Q9H813 350 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 PDLIM7Q9NR12 457 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 ST7Q9NRC1 585 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 NAGPAQ9UK23 515 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 L1RE1Q9UN81 338 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 GRID2IPA4D2P6 1211 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 CCDC85CA6NKD9 419 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 DDX3XO00571 662 aaKnown RBP eCLIP19.2■□□□□ 0.663e-26■■■■□ 24.4
SSB-201ENST00000260956 GFPT2O94808 682 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 PRKAR2AP13861 404 aaKnown RBP19.2■□□□□ 0.66
SSB-201ENST00000260956 TCP1P17987 556 aaKnown RBP19.2■□□□□ 0.66
SSB-201ENST00000260956 NPEPPSP55786 919 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 SNRPFP62306 86 aaKnown RBP19.2■□□□□ 0.66
SSB-201ENST00000260956 ARID5AQ03989 594 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 OLFML2BQ68BL8 750 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 HAUS6Q7Z4H7 955 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 MMGT1Q8N4V1 131 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 NSUN6Q8TEA1 469 aaKnown RBP19.2■□□□□ 0.66
SSB-201ENST00000260956 SPAG5Q96R06 1193 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 CBWD1Q9BRT8 395 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 DIS3Q9Y2L1 958 aaKnown RBP19.2■□□□□ 0.66
SSB-201ENST00000260956 FRMD4BQ9Y2L6 1034 aa19.2■□□□□ 0.66
SSB-201ENST00000260956 PMM2O15305 246 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 NCK2O43639 380 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 CCL5P13501 91 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 CCND3P30281 292 aaPredicted RBP19.19■□□□□ 0.66
SSB-201ENST00000260956 GABPB1Q06547 395 aaPredicted RBP19.19■□□□□ 0.66
SSB-201ENST00000260956 UTP14CQ5TAP6 766 aaKnown RBP19.19■□□□□ 0.66
SSB-201ENST00000260956 TMEM161BQ8NDZ6 487 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 ZSWIM2Q8NEG5 633 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 BSNDQ8WZ55 320 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 HVCN1Q96D96 273 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 SH2D3AQ9BRG2 576 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 TINF2Q9BSI4 451 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 STK33Q9BYT3 514 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 ABCB6Q9NP58 842 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 LUC7LQ9NQ29 371 aaKnown RBP19.19■□□□□ 0.66
SSB-201ENST00000260956 SAMM50Q9Y512 469 aa19.19■□□□□ 0.66
SSB-201ENST00000260956 PFASO15067 1338 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 IGSF9BQ9UPX0 1349 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 SPATA31C2B4DYI2 1134 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 BUB1O43683 1085 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 SNAI1O95863 264 aaPredicted RBP19.18■□□□□ 0.66
SSB-201ENST00000260956 FERP16591 822 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 SOX5P35711 763 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 MYL7Q01449 175 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 EPC2Q52LR7 807 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 MAEAQ7L5Y9 396 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 MAP4K3Q8IVH8 894 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 LRRC57Q8N9N7 239 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 LNX1Q8TBB1 728 aaPredicted RBP19.18■□□□□ 0.66
SSB-201ENST00000260956 SPIRE2Q8WWL2 714 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 KCNN1Q92952 543 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 PCDHA10Q9Y5I2 948 aa19.18■□□□□ 0.66
SSB-201ENST00000260956 EXOC3O60645 756 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 STAM2O75886 525 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 ADRB2P07550 413 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 DLG4P78352 724 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 PPP3CAQ08209 521 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 KIAA0753Q2KHM9 967 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 MAMDC4Q6UXC1 1216 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 NLRX1Q86UT6 975 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 NTPCRQ9BSD7 190 aaKnown RBP19.17■□□□□ 0.66
SSB-201ENST00000260956 XPNPEP1Q9NQW7 623 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 APEX2Q9UBZ4 518 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 P4HA2O15460 535 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 EVI5O60447 810 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 PALMO75781 387 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 RFX1P22670 979 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 ADSSP30520 456 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 SOX10P56693 466 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 XKR9Q5GH70 373 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 MEI1Q5TIA1 1274 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 SLC39A4Q6P5W5 647 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 ABHD15Q6UXT9 468 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 INTS8Q75QN2 995 aaKnown RBP19.17■□□□□ 0.66
SSB-201ENST00000260956 SYCP3Q8IZU3 236 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 SLC17A8Q8NDX2 589 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 RNF208Q9H0X6 261 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 PAK6Q9NQU5 681 aaPredicted RBP19.17■□□□□ 0.66
SSB-201ENST00000260956 SLC5A4Q9NY91 659 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 HSPBP1Q9NZL4 362 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 INTUQ9ULD6 942 aa19.17■□□□□ 0.66
SSB-201ENST00000260956 PLXNA1Q9UIW2 1896 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 NCANO14594 1321 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 ADGRA3Q8IWK6 1321 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 SLC16A4O15374 487 aa19.16■□□□□ 0.66
SSB-201ENST00000260956 CYBAP13498 195 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms