RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TCTN1Q2MV58 587 aa22.69■■□□□ 1.22
RTCA-201ENST00000260563 ZNF365Q70YC5 407 aa22.69■■□□□ 1.22
RTCA-201ENST00000260563 C16orf59Q7L2K0 433 aa22.69■■□□□ 1.22
RTCA-201ENST00000260563 GLIS3Q8NEA6 775 aa22.69■■□□□ 1.22
RTCA-201ENST00000260563 CPB2Q96IY4 423 aa22.69■■□□□ 1.22
RTCA-201ENST00000260563 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.69■■□□□ 1.223e-8■■■□□ 15
RTCA-201ENST00000260563 MRPL4Q9BYD3 311 aaKnown RBP22.69■■□□□ 1.22
RTCA-201ENST00000260563 CHST12Q9NRB3 414 aa22.69■■□□□ 1.22
RTCA-201ENST00000260563 TBX20Q9UMR3 447 aa22.69■■□□□ 1.22
RTCA-201ENST00000260563 FSD2A1L4K1 749 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 EDN1P05305 212 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 ARF4P18085 180 aaPredicted RBP22.68■■□□□ 1.22
RTCA-201ENST00000260563 IQCB1Q15051 598 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 TMEM240Q5SV17 173 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 NOTUMQ6P988 496 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 OTOP2Q7RTS6 562 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 MAP4K3Q8IVH8 894 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 MYOCDQ8IZQ8 938 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 GUF1Q8N442 669 aaKnown RBP22.68■■□□□ 1.22
RTCA-201ENST00000260563 BICD1Q96G01 975 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 DHTKD1Q96HY7 919 aaPredicted RBP22.68■■□□□ 1.22
RTCA-201ENST00000260563 GDF15Q99988 308 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 CTNND2Q9UQB3 1225 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 UBE4BO95155 1302 aa22.68■■□□□ 1.22
RTCA-201ENST00000260563 ABHD14A-ACY1A0A1B0GW23 586 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 PSMA7O14818 248 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 EIF3DO15371 548 aaKnown RBP eCLIP22.67■■□□□ 1.22
RTCA-201ENST00000260563 EFCAB14O75071 495 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 KIF20AO95235 890 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 PAK1Q13153 545 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 L1TD1Q5T7N2 865 aaKnown RBP22.67■■□□□ 1.22
RTCA-201ENST00000260563 TWF2Q6IBS0 349 aaKnown RBP22.67■■□□□ 1.22
RTCA-201ENST00000260563 EPM2AIP1Q7L775 607 aaPredicted RBP22.67■■□□□ 1.22
RTCA-201ENST00000260563 LUZP1Q86V48 1076 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 DHX40Q8IX18 779 aaKnown RBP22.67■■□□□ 1.22
RTCA-201ENST00000260563 SCFD1Q8WVM8 642 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 NELFBQ8WX92 580 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 STRA6Q9BX79 667 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 UBE2OQ9C0C9 1292 aaKnown RBP22.67■■□□□ 1.22
RTCA-201ENST00000260563 BECN2A8MW95 431 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 MGEA5O60502 916 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 HOXA11P31270 313 aaPredicted RBP22.67■■□□□ 1.22
RTCA-201ENST00000260563 AOPEPQ8N6M6 819 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 LINC01599Q8WXQ3 324 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 CCDC51Q96ER9 411 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 ACCSQ96QU6 501 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 ADAM2Q99965 735 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 TSPYL2Q9H2G4 693 aaPredicted RBP22.67■■□□□ 1.22
RTCA-201ENST00000260563 MTIF3Q9H2K0 278 aaKnown RBP22.67■■□□□ 1.22
RTCA-201ENST00000260563 RWDD2AQ9UIY3 292 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 EXOC7Q9UPT5 735 aa22.67■■□□□ 1.22
RTCA-201ENST00000260563 TTC3P53804 2025 aa22.66■■□□□ 1.22
RTCA-201ENST00000260563 TTLL13PA6NNM8 815 aa22.66■■□□□ 1.22
RTCA-201ENST00000260563 ZBBXA8MT70 800 aa22.66■■□□□ 1.22
RTCA-201ENST00000260563 SMTNL1A8MU46 457 aa22.66■■□□□ 1.22
RTCA-201ENST00000260563 HNRNPDLO14979 420 aaKnown RBP22.66■■□□□ 1.22
RTCA-201ENST00000260563 N4BP3O15049 544 aa22.66■■□□□ 1.22
RTCA-201ENST00000260563 PRPF6O94906 941 aaKnown RBP22.66■■□□□ 1.22
RTCA-201ENST00000260563 DSC3Q14574 896 aa22.66■■□□□ 1.22
RTCA-201ENST00000260563 ATF7IP2Q5U623 682 aa22.66■■□□□ 1.22
RTCA-201ENST00000260563 RGS18Q9NS28 235 aa22.66■■□□□ 1.22
RTCA-201ENST00000260563 USP20Q9Y2K6 914 aa22.66■■□□□ 1.22
RTCA-201ENST00000260563 IKBKBO14920 756 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 KCNJ6P48051 423 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 LIG4P49917 911 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 STX17P56962 302 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 MYL5Q02045 173 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 BMT2Q1RMZ1 405 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 ZPBP2Q6X784 338 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 ENOX1Q8TC92 643 aaKnown RBP22.65■■□□□ 1.22
RTCA-201ENST00000260563 ZNF507Q8TCN5 953 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 HERVK_113Q902F9 699 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 MED15Q96RN5 788 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 ACO2Q99798 780 aaKnown RBP22.65■■□□□ 1.22
RTCA-201ENST00000260563 ADPGKQ9BRR6 497 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 TARS2Q9BW92 718 aaKnown RBP22.65■■□□□ 1.22
RTCA-201ENST00000260563 PDZD7Q9H5P4 517 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 TMEM206Q9H813 350 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 C1orf112Q9NSG2 853 aa22.65■■□□□ 1.22
RTCA-201ENST00000260563 GBF1Q92538 1859 aa22.64■■□□□ 1.22
RTCA-201ENST00000260563 A0A1B0GUA9 196 aa22.64■■□□□ 1.21
RTCA-201ENST00000260563 CCNE1P24864 410 aa22.64■■□□□ 1.21
RTCA-201ENST00000260563 WDR5P61964 334 aaKnown RBP22.64■■□□□ 1.21
RTCA-201ENST00000260563 KCNA1Q09470 495 aa22.64■■□□□ 1.21
RTCA-201ENST00000260563 SLC27A1Q6PCB7 646 aa22.64■■□□□ 1.21
RTCA-201ENST00000260563 CDR2LQ86X02 465 aaPredicted RBP22.64■■□□□ 1.21
RTCA-201ENST00000260563 SYCP3Q8IZU3 236 aa22.64■■□□□ 1.21
RTCA-201ENST00000260563 P2RX5Q93086 422 aa22.64■■□□□ 1.21
RTCA-201ENST00000260563 TNFSF13BQ9Y275 285 aa22.64■■□□□ 1.21
RTCA-201ENST00000260563 CITO14578 2027 aa22.64■■□□□ 1.21
RTCA-201ENST00000260563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.63■■□□□ 1.21
RTCA-201ENST00000260563 BICDL2A1A5D9 508 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 GOLGA6L19H0YKK7 550 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 PIGRP01833 764 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 RAB27AP51159 221 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 NCAPHQ15003 741 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 C9orf50Q5SZB4 431 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 CENPPQ6IPU0 288 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 SLC24A5Q71RS6 500 aa22.63■■□□□ 1.21
RTCA-201ENST00000260563 NELFCDQ8IXH7 590 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms