RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 TCHPQ9BT92 498 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 SRRTQ9BXP5 876 aaKnown RBP17.07■□□□□ 0.32
GYPC-201ENST00000259254 FANCLQ9NW38 375 aa17.07■□□□□ 0.32
GYPC-201ENST00000259254 CGNQ9P2M7 1197 aaKnown RBP17.07■□□□□ 0.32
GYPC-201ENST00000259254 MAGEC2Q9UBF1 373 aaPredicted RBP17.07■□□□□ 0.32
GYPC-201ENST00000259254 CD4P01730 458 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 PIGRP01833 764 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 CHRNA1P02708 482 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 EDN1P05305 212 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 HARSP12081 509 aaKnown RBP17.06■□□□□ 0.32
GYPC-201ENST00000259254 CKBP12277 381 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 MGAT3Q09327 533 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 ADAM9Q13443 819 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 FAM187BQ17R55 369 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 ZNF618Q5T7W0 954 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 ATF7IP2Q5U623 682 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 FOXR2Q6PJQ5 311 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 ZPBP2Q6X784 338 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 ANKRD33Q7Z3H0 272 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 CAGE1Q8TC20 777 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 TMEM40Q8WWA1 233 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 POMGNT1Q8WZA1 660 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 UBE2OQ9C0C9 1292 aaKnown RBP17.06■□□□□ 0.32
GYPC-201ENST00000259254 PCIF1Q9H4Z3 704 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 SAMSN1Q9NSI8 373 aaKnown RBP17.06■□□□□ 0.32
GYPC-201ENST00000259254 PRKAG2Q9UGJ0 569 aa17.06■□□□□ 0.32
GYPC-201ENST00000259254 CNTNAP2Q9UHC6 1331 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 TULP1O00294 542 aaPredicted RBP17.05■□□□□ 0.32
GYPC-201ENST00000259254 TSPAN1O60635 241 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 EXOC3O60645 756 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 RPS6KA5O75582 802 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 IQCF3P0C7M6 154 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
GYPC-201ENST00000259254 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 CCDC40Q4G0X9 1142 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 CEP135Q66GS9 1140 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 SLFN12LQ6IEE8 588 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 ZBTB33Q86T24 672 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 FAM114A1Q8IWE2 563 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 TDHQ8IZJ6 230 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 CPB2Q96IY4 423 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 CEP63Q96MT8 703 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 TOX2Q96NM4 488 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 ACO2Q99798 780 aaKnown RBP17.05■□□□□ 0.32
GYPC-201ENST00000259254 LBHD1Q9BQE6 289 aaPredicted RBP17.05■□□□□ 0.32
GYPC-201ENST00000259254 CBWD1Q9BRT8 395 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 THAP9Q9H5L6 903 aa17.05■□□□□ 0.32
GYPC-201ENST00000259254 NOC2LQ9Y3T9 749 aaKnown RBP17.05■□□□□ 0.32
GYPC-201ENST00000259254 TTLL13PA6NNM8 815 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 SOX1O00570 391 aaPredicted RBP17.04■□□□□ 0.32
GYPC-201ENST00000259254 TOM1L1O75674 476 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 GHRP10912 638 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 SELPP16109 830 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 GARTP22102 1010 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 NFX1Q12986 1120 aaKnown RBP17.04■□□□□ 0.32
GYPC-201ENST00000259254 PCBP1Q15365 356 aaKnown RBP eCLIP17.04■□□□□ 0.32
GYPC-201ENST00000259254 AMHR2Q16671 573 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 ZNF568Q3ZCX4 644 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 FAM26DQ5JW98 314 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 SLC39A4Q6P5W5 647 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 LRRC55Q6ZSA7 311 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 LRRC8DQ7L1W4 858 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 CDR2LQ86X02 465 aaPredicted RBP17.04■□□□□ 0.32
GYPC-201ENST00000259254 ANKRD20A12PQ8NF67 263 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 MSTO1Q9BUK6 570 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 HSPBP1Q9NZL4 362 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 PIN4Q9Y237 131 aaKnown RBP17.04■□□□□ 0.32
GYPC-201ENST00000259254 FRMD4BQ9Y2L6 1034 aa17.04■□□□□ 0.32
GYPC-201ENST00000259254 GOLGA8IPA6NC78 632 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 GOLGA8JA6NMD2 632 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 N4BP3O15049 544 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 CLDN3O15551 220 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 ARF4P18085 180 aaPredicted RBP17.03■□□□□ 0.32
GYPC-201ENST00000259254 SPAG1Q07617 926 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 FAAP100Q0VG06 881 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 PAK2Q13177 524 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 MYBPC2Q14324 1141 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 NFIL3Q16649 462 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 FBXO47Q5MNV8 452 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 EEF1DP3Q658K8 133 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 MPZL3Q6UWV2 235 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 TSHZ1Q6ZSZ6 1077 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 FAM228AQ86W67 206 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 C12orf56Q8IXR9 622 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 XXYLT1Q8NBI6 393 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 SAAL1Q96ER3 474 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 ZBTB45Q96K62 511 aaPredicted RBP17.03■□□□□ 0.32
GYPC-201ENST00000259254 CNOT6LQ96LI5 555 aaKnown RBP17.03■□□□□ 0.32
GYPC-201ENST00000259254 PPP1R12CQ9BZL4 782 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 GRPEL1Q9HAV7 217 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
GYPC-201ENST00000259254 TMEM39AQ9NV64 488 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 TNFSF13BQ9Y275 285 aa17.03■□□□□ 0.32
GYPC-201ENST00000259254 FSD2A1L4K1 749 aa17.02■□□□□ 0.32
GYPC-201ENST00000259254 KCNJ18B7U540 433 aa17.02■□□□□ 0.32
GYPC-201ENST00000259254 GPR182O15218 404 aa17.02■□□□□ 0.32
GYPC-201ENST00000259254 CLTBP09497 229 aa17.02■□□□□ 0.32
GYPC-201ENST00000259254 EPB41P11171 864 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms