RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 DLG4P78352 724 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 HHATQ5VTY9 493 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 ARHGEF16Q5VV41 709 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 ZNF449Q6P9G9 518 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 ZNF720Q7Z2F6 126 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 PODNQ7Z5L7 613 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 LDHDQ86WU2 507 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 CPA5Q8WXQ8 436 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 FAM213AQ9BRX8 229 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 TRIM7Q9C029 511 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 VCPKMTQ9H867 229 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 ERVK-5Q9HDB9 667 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 HSPBP1Q9NZL4 362 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 TRPC6Q9Y210 931 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 PHRF1Q9P1Y6 1649 aaKnown RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 GAKO14976 1311 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 LRRIQ4A6NIV6 560 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 PI4K2BG5E9Z4 385 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 GOLGA8SH3BPF8 625 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 GOLGA8MH3BSY2 632 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 TRAPPC3O43617 180 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 SLITRK3O94933 977 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 NPR1P16066 1061 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 TNFRSF8P28908 595 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 SCTRP47872 440 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 SESN3P58005 492 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 PTENP60484 403 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 GABPAQ06546 454 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 MTMR1Q13613 665 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 SLC47A2Q86VL8 602 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 CBWD2Q8IUF1 395 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 NLGN1Q8N2Q7 840 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 MREGQ8N565 214 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 DHX38Q92620 1227 aaKnown RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 IWS1Q96ST2 819 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 ZNF341Q9BYN7 854 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 UNC45AQ9H3U1 944 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 RAVER2Q9HCJ3 691 aaKnown RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 SEL1LQ9UBV2 794 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 C4AP0C0L4 1744 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 C4BP0C0L5 1744 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 SIPA1L3O60292 1781 aaPredicted RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 ROBO3Q96MS0 1386 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 SRCAPQ6ZRS2 3230 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 MYO3BQ8WXR4 1341 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 EXOC1LA0A1B0GW35 172 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 TMEM120BA0PK00 339 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 RASA4BC9J798 803 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 OPLAHO14841 1288 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 RASA4O43374 803 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 SPAG7O75391 227 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 PYGMP11217 842 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 CD58P19256 250 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 ALDH3A1P30838 453 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 PEX19P40855 299 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 PIK3CAP42336 1068 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 RPL21P46778 160 aaKnown RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 STRN3Q13033 797 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 RASA3Q14644 834 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 LCE2DQ5TA82 110 aaPredicted RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 PHLDB3Q6NSJ2 640 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 HHIPL2Q6UWX4 724 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 SEPT14Q6ZU15 432 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 ARHGEF19Q8IW93 802 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 LRRC57Q8N9N7 239 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 ETNPPLQ8TBG4 499 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 KCNV2Q8TDN2 545 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 SGSM3Q96HU1 749 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 AGBL1Q96MI9 1066 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 CRAMP1Q96RY5 1269 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 POLR3CQ9BUI4 534 aaPredicted RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 TUFT1Q9NNX1 390 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 TOPORSQ9NS56 1045 aaPredicted RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 SEPT9Q9UHD8 586 aaPredicted RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 DIS3Q9Y2L1 958 aaKnown RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 PCDHB4Q9Y5E5 795 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 TJP1Q07157 1748 aa5.08□□□□□ -1.6
USP44-201ENST00000258499 PARP4Q9UKK3 1724 aaKnown RBP5.08□□□□□ -1.6
USP44-201ENST00000258499 CCT8L1PA6NM43 557 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 RTN2O75298 545 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 NEBLO76041 1014 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 P4HBP07237 508 aaKnown RBP5.07□□□□□ -1.6
USP44-201ENST00000258499 SNHG28P0DPA3 235 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 SCP2P22307 547 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 CHRNA5P30532 468 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 GBP1P32455 592 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 PCK1P35558 622 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 PRKCIP41743 596 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 QARSP47897 775 aaKnown RBP5.07□□□□□ -1.6
USP44-201ENST00000258499 DDR1Q08345 913 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 PRKG1Q13976 671 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 PPP2R5AQ15172 486 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 MTERF2Q49AM1 385 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 SLC13A5Q86YT5 568 aaPredicted RBP5.07□□□□□ -1.6
USP44-201ENST00000258499 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.07□□□□□ -1.6
USP44-201ENST00000258499 ATP8B4Q8TF62 1192 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 PRMT6Q96LA8 375 aaPredicted RBP5.07□□□□□ -1.6
USP44-201ENST00000258499 ZSWIM1Q9BR11 485 aa5.07□□□□□ -1.6
USP44-201ENST00000258499 DDX23Q9BUQ8 820 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms