RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 AGAP3Q96P47 875 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 ANP32DO95626 131 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 RARBP10826 455 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 FAM118BQ9BPY3 351 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 JPH1Q9HDC5 661 aaPredicted RBP19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 HECW2Q9P2P5 1572 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 PCDHA10Q9Y5I2 948 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 KRT14P02533 472 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 ATICP31939 592 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 BCAR1P56945 870 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 LBRQ14739 615 aaKnown RBP19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 IMPG1Q17R60 797 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 WDR72Q3MJ13 1102 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 IRX2Q9BZI1 471 aaPredicted RBP19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 GOLGA8RI6L899 631 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 FGFR4P22455 802 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 SP8Q8IXZ3 490 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 SENP2Q9HC62 589 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 COPS2P61201 443 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 EGFL8Q99944 293 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 NDFIP2Q9NV92 336 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 PLA2G4FQ68DD2 849 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 CCDC137Q6PK04 289 aaKnown RBP19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 NEDD1Q8NHV4 660 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 KCNV2Q8TDN2 545 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 TRPC7Q9HCX4 862 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 ZCCHC17Q9NP64 241 aaKnown RBP19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 CNOT7Q9UIV1 285 aaKnown RBP19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 ROR1Q01973 937 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 EMBQ6PCB8 327 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 ASIC4Q96FT7 647 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 STRIP2Q9ULQ0 834 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 ZDHHC9Q9Y397 364 aa19.85■□□□□ 0.77
SMARCC1-201ENST00000254480 PDGFRBP09619 1106 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 STAT5BP51692 787 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 PPP1R18Q6NYC8 613 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 SUN2Q9UH99 717 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 MIF4GDA9UHW6 222 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 LUC7L3O95232 432 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 POLE2P56282 527 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 GLE1Q53GS7 698 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 SARM1Q6SZW1 724 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 TRIM55Q9BYV6 548 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 GRIK1P39086 918 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 ATP2C1P98194 919 aaPredicted RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 METTL16Q86W50 562 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 NDUFAF2Q8N183 169 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 ZCWPW1Q9H0M4 648 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 CYP4F11Q9HBI6 524 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 GGT7Q9UJ14 662 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 NCAPD2Q15021 1401 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 FLT1P17948 1338 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 TNPO2O14787 897 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 GYG2O15488 501 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 GRAP2O75791 330 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 NCAPHQ15003 741 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 R3HDM1Q15032 1099 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 USP33Q8TEY7 942 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 C2orf40Q9H1Z8 148 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 IP6K2Q9UHH9 426 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 AMACRQ9UHK6 382 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 E2F8A0AVK6 867 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 PPARGP37231 505 aaPredicted RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 WDR75Q8IWA0 830 aaKnown RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 ULK4Q96C45 1275 aa19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 LBHD1Q9BQE6 289 aaPredicted RBP19.84■□□□□ 0.77
SMARCC1-201ENST00000254480 PRKCBP05771 671 aa19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 TBXAS1P24557 533 aaPredicted RBP19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 EFHC2Q5JST6 749 aa19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 RMDN1Q96DB5 314 aa19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 SFMBT1Q9UHJ3 866 aa19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 APOBEC2Q9Y235 224 aaKnown RBP19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 DYNC1LI2O43237 492 aaPredicted RBP19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 CEP55Q53EZ4 464 aa19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 FASTKD5Q7L8L6 764 aaKnown RBP19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 STAP1Q9ULZ2 295 aa19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 SLC4A7Q9Y6M7 1214 aa19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 ADGRG1Q9Y653 693 aa19.83■□□□□ 0.77
SMARCC1-201ENST00000254480 KRT38O76015 456 aa19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 BTBD8Q5XKL5 378 aa19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 LIMA1Q9UHB6 759 aaKnown RBP19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 E2F6O75461 281 aa19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 NUMBP49757 651 aa19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 PRAMEP78395 509 aa19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 NAALADL2Q58DX5 795 aa19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 MFSD14CQ5VZR4 134 aa19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 PID1Q7Z2X4 250 aa19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 AGAP1Q9UPQ3 857 aa19.83■□□□□ 0.76
SMARCC1-201ENST00000254480 SHROOM2Q13796 1616 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 DUOXA2Q1HG44 320 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 CHP1Q99653 195 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 FBXO2Q9UK22 296 aaPredicted RBP19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 GGPS1O95749 300 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ZC2HC1CQ53FD0 456 aaPredicted RBP19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 MDH1BQ5I0G3 518 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 OSBPL5Q9H0X9 879 aaPredicted RBP19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 MID2Q9UJV3 735 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 SNX9Q9Y5X1 595 aa19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 SESN2P58004 480 aaPredicted RBP19.82■□□□□ 0.76
SMARCC1-201ENST00000254480 ACAP3Q96P50 834 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms