RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 RASIP1Q5U651 963 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 RTN4RL1Q86UN2 441 aaPredicted RBP15.48■□□□□ 0.07
VPS25-201ENST00000253794 CRIPAKQ8N1N5 446 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 HERVK_113Q902F9 699 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 PDZD7Q9H5P4 517 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 C1orf112Q9NSG2 853 aa15.48■□□□□ 0.07
VPS25-201ENST00000253794 CGNQ9P2M7 1197 aaKnown RBP15.48■□□□□ 0.07
VPS25-201ENST00000253794 PIN4Q9Y237 131 aaKnown RBP15.48■□□□□ 0.07
VPS25-201ENST00000253794 C9IYK1 514 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 ZNF623O75123 536 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 PRPF6O94906 941 aaKnown RBP15.47■□□□□ 0.07
VPS25-201ENST00000253794 FGBP02675 491 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 ZSCAN20P17040 1043 aaPredicted RBP15.47■□□□□ 0.07
VPS25-201ENST00000253794 RAB27AP51159 221 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 MCL1Q07820 350 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 KNOP1Q1ED39 458 aaKnown RBP15.47■□□□□ 0.07
VPS25-201ENST00000253794 UBXN11Q5T124 520 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 SLC39A4Q6P5W5 647 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 SLC27A1Q6PCB7 646 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 FOXR2Q6PJQ5 311 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 ZNF365Q70YC5 407 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 MYOCDQ8IZQ8 938 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 ADAM2Q99965 735 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.47■□□□□ 0.071e-6■□□□□ 10.5
VPS25-201ENST00000253794 TARS2Q9BW92 718 aaKnown RBP15.47■□□□□ 0.07
VPS25-201ENST00000253794 GDAQ9Y2T3 454 aa15.47■□□□□ 0.07
VPS25-201ENST00000253794 A0A0U1RQF3 1178 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.46■□□□□ 0.07
VPS25-201ENST00000253794 ENPP3O14638 875 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 HNRNPDLO14979 420 aaKnown RBP15.46■□□□□ 0.07
VPS25-201ENST00000253794 TGFB1I1O43294 461 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 ACRP10323 421 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 DCAF4L1Q3SXM0 396 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 CAVIN1Q6NZI2 390 aaKnown RBP15.46■□□□□ 0.07
VPS25-201ENST00000253794 MPZL3Q6UWV2 235 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 SLC24A5Q71RS6 500 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 MRPL10Q7Z7H8 261 aaKnown RBP15.46■□□□□ 0.07
VPS25-201ENST00000253794 C12orf56Q8IXR9 622 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 ADSSL1Q8N142 457 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 CPB2Q96IY4 423 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 GBP3Q9H0R5 595 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 PRO3102Q9H379 93 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 KCTD10Q9H3F6 313 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 ELAC1Q9H777 363 aaKnown RBP15.46■□□□□ 0.07
VPS25-201ENST00000253794 PCDH10Q9P2E7 1040 aa15.46■□□□□ 0.07
VPS25-201ENST00000253794 RANBP2P49792 3224 aaKnown RBP15.45■□□□□ 0.06
VPS25-201ENST00000253794 MICAL3Q7RTP6 2002 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 PDXKO00764 312 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 LETM1O95202 739 aaPredicted RBP15.45■□□□□ 0.06
VPS25-201ENST00000253794 MCF2P10911 925 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 SKIP12755 728 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 GARTP22102 1010 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 ADSSP30520 456 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 PRCPP42785 496 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 LIG4P49917 911 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 WDR5P61964 334 aaKnown RBP15.45■□□□□ 0.06
VPS25-201ENST00000253794 NFIL3Q16649 462 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 ZCWPW2Q504Y3 356 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 EEF1DP3Q658K8 133 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 SLFN12LQ6IEE8 588 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 APBB1IPQ7Z5R6 666 aaPredicted RBP15.45■□□□□ 0.06
VPS25-201ENST00000253794 ZNF598Q86UK7 904 aaKnown RBP15.45■□□□□ 0.06
VPS25-201ENST00000253794 MLKLQ8NB16 471 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 GOLGA5Q8TBA6 731 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 CDT1Q9H211 546 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 FAM105AQ9NUU6 356 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 TYW1Q9NV66 732 aaKnown RBP15.45■□□□□ 0.06
VPS25-201ENST00000253794 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
VPS25-201ENST00000253794 TRAF3IP3Q9Y228 551 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 USP20Q9Y2K6 914 aa15.45■□□□□ 0.06
VPS25-201ENST00000253794 A0A0B4J269 797 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 PPP1R3GB7ZBB8 358 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 ANKRD63C9JTQ0 380 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 KIAA0391O15091 583 aaKnown RBP15.44■□□□□ 0.06
VPS25-201ENST00000253794 CLDN3O15551 220 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 FAM189A1O60320 539 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 EOMESO95936 686 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 NLRP12P59046 1061 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 POU5F1Q01860 360 aaKnown RBP15.44■□□□□ 0.06
VPS25-201ENST00000253794 MYBPC2Q14324 1141 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 NOLC1Q14978 699 aaKnown RBP eCLIP15.44■□□□□ 0.06
VPS25-201ENST00000253794 CT47A1Q5JQC4 288 aaPredicted RBP15.44■□□□□ 0.06
VPS25-201ENST00000253794 TWF2Q6IBS0 349 aaKnown RBP15.44■□□□□ 0.06
VPS25-201ENST00000253794 CENPPQ6IPU0 288 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 SLC9A9Q8IVB4 645 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 SMYD4Q8IYR2 804 aaPredicted RBP15.44■□□□□ 0.06
VPS25-201ENST00000253794 RSPH1Q8WYR4 309 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 BICD1Q96G01 975 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 DHTKD1Q96HY7 919 aaPredicted RBP15.44■□□□□ 0.06
VPS25-201ENST00000253794 ADPGKQ9BRR6 497 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 EIF2AQ9BY44 585 aaKnown RBP15.44■□□□□ 0.06
VPS25-201ENST00000253794 HAPLN2Q9GZV7 340 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 MTIF3Q9H2K0 278 aaKnown RBP15.44■□□□□ 0.06
VPS25-201ENST00000253794 AGPAT3Q9NRZ7 376 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 TMEM161AQ9NX61 479 aa15.44■□□□□ 0.06
VPS25-201ENST00000253794 BIN1O00499 593 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
VPS25-201ENST00000253794 ATF7P17544 494 aaPredicted RBP15.43■□□□□ 0.06
VPS25-201ENST00000253794 STIM1Q13586 685 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 KYAT1Q16773 422 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms