RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ADAMTS19Q8TE59 1207 aa25.34■■□□□ 1.65
LSM4-201ENST00000252816 GAD1Q99259 594 aa25.34■■□□□ 1.65
LSM4-201ENST00000252816 APOL6Q9BWW8 343 aa25.34■■□□□ 1.65
LSM4-201ENST00000252816 TRIM6Q9C030 488 aaPredicted RBP25.34■■□□□ 1.65
LSM4-201ENST00000252816 GBP3Q9H0R5 595 aa25.34■■□□□ 1.65
LSM4-201ENST00000252816 PDZD7Q9H5P4 517 aa25.34■■□□□ 1.65
LSM4-201ENST00000252816 IGFLR1Q9H665 355 aa25.34■■□□□ 1.65
LSM4-201ENST00000252816 CLDND1Q9NY35 253 aa25.34■■□□□ 1.65
LSM4-201ENST00000252816 DNAJB4Q9UDY4 337 aa25.34■■□□□ 1.65
LSM4-201ENST00000252816 SLC26A4O43511 780 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 DDHD2O94830 711 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 POMCP01189 267 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 GALTP07902 379 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 GUCY2CP25092 1073 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 LTBRP36941 435 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 NPTX2P47972 431 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 CEBPZQ03701 1054 aaKnown RBP25.33■■□□□ 1.65
LSM4-201ENST00000252816 RAD51AP2Q09MP3 1159 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 PRPF4BQ13523 1007 aaKnown RBP25.33■■□□□ 1.65
LSM4-201ENST00000252816 LEXMQ3ZCV2 418 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 EP400NLQ6ZTU2 488 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 DRC1Q96MC2 740 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 USP28Q96RU2 1077 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 UBN1Q9NPG3 1134 aa25.33■■□□□ 1.65
LSM4-201ENST00000252816 FBXO2Q9UK22 296 aaPredicted RBP25.33■■□□□ 1.65
LSM4-201ENST00000252816 ARL5CA6NH57 179 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 CCDC169A6NNP5 214 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 SFI1A8K8P3 1242 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 H3BQ06 376 aaPredicted RBP25.32■■□□□ 1.64
LSM4-201ENST00000252816 INPPL1O15357 1258 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 LINC01565O15544 149 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 NCK2O43639 380 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 MLH1P40692 756 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 SLC11A1P49279 550 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 EFNA5P52803 228 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 KRT17Q04695 432 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 DLX2Q07687 328 aaPredicted RBP25.32■■□□□ 1.64
LSM4-201ENST00000252816 KARSQ15046 597 aaKnown RBP25.32■■□□□ 1.64
LSM4-201ENST00000252816 USP49Q70CQ1 688 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.32■■□□□ 1.64
LSM4-201ENST00000252816 BCL7CQ8WUZ0 217 aaPredicted RBP25.32■■□□□ 1.64
LSM4-201ENST00000252816 CALML4Q96GE6 196 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 ZFP42Q96MM3 310 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 NECAB3Q96P71 396 aaPredicted RBP25.32■■□□□ 1.64
LSM4-201ENST00000252816 ZSCAN16Q9H4T2 348 aaPredicted RBP25.32■■□□□ 1.64
LSM4-201ENST00000252816 BLOC1S4Q9NUP1 217 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 MIOSQ9NXC5 875 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 KANSL3Q9P2N6 904 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 PUF60Q9UHX1 559 aaKnown RBP25.32■■□□□ 1.64
LSM4-201ENST00000252816 TCF20Q9UGU0 1960 aaKnown RBP25.32■■□□□ 1.64
LSM4-201ENST00000252816 MUC3AQ02505 3323 aa25.32■■□□□ 1.64
LSM4-201ENST00000252816 N4BP3O15049 544 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 PLCG1P19174 1290 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 AKAP5P24588 427 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 NRIP1P48552 1158 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 DMP1Q13316 513 aaPredicted RBP25.31■■□□□ 1.64
LSM4-201ENST00000252816 ARSHQ5FYA8 562 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 SPECC1Q5M775 1068 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 NT5DC1Q5TFE4 455 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 PLPP4Q5VZY2 271 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 EEF1DP3Q658K8 133 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 RBM23Q86U06 439 aaKnown RBP25.31■■□□□ 1.64
LSM4-201ENST00000252816 PPP2R3CQ969Q6 453 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 EPSTI1Q96J88 318 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 TCF25Q9BQ70 676 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 TIPINQ9BVW5 301 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 GIT1Q9Y2X7 761 aa25.31■■□□□ 1.64
LSM4-201ENST00000252816 NPHP3-ACAD11A0A0J9YXS1 232 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 TMEM132AQ24JP5 1023 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 PDE12Q6L8Q7 609 aaKnown RBP25.3■■□□□ 1.64
LSM4-201ENST00000252816 TAS1R3Q7RTX0 852 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 HACE1Q8IYU2 909 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 TMEM169Q96HH4 297 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 IGSF21Q96ID5 467 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 CLIC6Q96NY7 704 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 CCSER1Q9C0I3 900 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 TLE6Q9H808 572 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 ENTPD7Q9NQZ7 604 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 ARHGAP28Q9P2N2 729 aa25.3■■□□□ 1.64
LSM4-201ENST00000252816 SRPRBQ9Y5M8 271 aaKnown RBP25.3■■□□□ 1.64
LSM4-201ENST00000252816 K7ERI5 159 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 PER2O15055 1255 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 TBX10O75333 385 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 SCNN1GP51170 649 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 ADAM15Q13444 863 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 GSTCDQ8NEC7 633 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 UHRF1Q96T88 793 aaPredicted RBP25.29■■□□□ 1.64
LSM4-201ENST00000252816 C17orf75Q9HAS0 396 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 KMT5AQ9NQR1 393 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 KCND2Q9NZV8 630 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 KLK14Q9P0G3 267 aa25.29■■□□□ 1.64
LSM4-201ENST00000252816 HIDE1A8MVS5 230 aa25.28■■□□□ 1.64
LSM4-201ENST00000252816 HSP90AA1P07900 732 aaKnown RBP25.28■■□□□ 1.64
LSM4-201ENST00000252816 CACNB1Q02641 598 aaPredicted RBP25.28■■□□□ 1.64
LSM4-201ENST00000252816 DHX8Q14562 1220 aaKnown RBP25.28■■□□□ 1.64
LSM4-201ENST00000252816 SLC39A14Q15043 492 aa25.28■■□□□ 1.64
LSM4-201ENST00000252816 FOXD4L5Q5VV16 416 aaPredicted RBP25.28■■□□□ 1.64
LSM4-201ENST00000252816 TMC7Q7Z402 723 aa25.28■■□□□ 1.64
LSM4-201ENST00000252816 EFHBQ8N7U6 833 aa25.28■■□□□ 1.64
LSM4-201ENST00000252816 FOXD4L4Q8WXT5 416 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms