RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CABP7Q86V35 215 aa23.39■■□□□ 1.33
NEDD8-201ENST00000250495 SUGP1Q8IWZ8 645 aaKnown RBP23.39■■□□□ 1.33
NEDD8-201ENST00000250495 C12orf76Q8N812 135 aaPredicted RBP23.39■■□□□ 1.33
NEDD8-201ENST00000250495 CPB2Q96IY4 423 aa23.39■■□□□ 1.33
NEDD8-201ENST00000250495 VN1R3Q9BXE9 311 aa23.39■■□□□ 1.33
NEDD8-201ENST00000250495 TRIM6Q9C030 488 aaPredicted RBP23.39■■□□□ 1.33
NEDD8-201ENST00000250495 MRPL17Q9NRX2 175 aaKnown RBP23.39■■□□□ 1.33
NEDD8-201ENST00000250495 INPPL1O15357 1258 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 NR1I2O75469 434 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 GLRA2P23416 452 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 KLRC2P26717 231 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 MCM7P33993 719 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 KLHL5Q96PQ7 755 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 GAD1Q99259 594 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 LLPHQ9BRT6 129 aaKnown RBP23.38■■□□□ 1.33
NEDD8-201ENST00000250495 TMEM60Q9H2L4 133 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 RNF39Q9H2S5 420 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 TUFT1Q9NNX1 390 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 CDH22Q9UJ99 828 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 SSX2IPQ9Y2D8 614 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 GIT1Q9Y2X7 761 aa23.38■■□□□ 1.33
NEDD8-201ENST00000250495 MYO10Q9HD67 2058 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 A0A087WWV3 80 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 ARL5CA6NH57 179 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 POTEMA6NI47 508 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 SEC24BO95487 1268 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 SSBP05455 408 aaKnown RBP eCLIP23.37■■□□□ 1.33
NEDD8-201ENST00000250495 ARF4P18085 180 aaPredicted RBP23.37■■□□□ 1.33
NEDD8-201ENST00000250495 OR1G1P47890 313 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 GUCY1B3Q02153 619 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 ST3GAL1Q11201 340 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 AMHR2Q16671 573 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 KIAA1841Q6NSI8 718 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 COLGALT2Q8IYK4 626 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 FBXL6Q8N531 539 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 C8orf76Q96K31 380 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 NACC1Q96RE7 527 aa23.37■■□□□ 1.33
NEDD8-201ENST00000250495 POLR3FQ9H1D9 316 aaPredicted RBP23.37■■□□□ 1.33
NEDD8-201ENST00000250495 SPDYE4A6NLX3 237 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 USO1O60763 962 aaKnown RBP23.36■■□□□ 1.33
NEDD8-201ENST00000250495 LILRB3O75022 631 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 SOD2P04179 222 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 SPATA31C1P0DKV0 1188 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 NHLH1Q02575 133 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 ORC2Q13416 577 aaPredicted RBP23.36■■□□□ 1.33
NEDD8-201ENST00000250495 CATSPER3Q86XQ3 398 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 MCPH1Q8NEM0 835 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 ERMNQ8TAM6 284 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 PRRX2Q99811 253 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 POLR3CQ9BUI4 534 aaPredicted RBP23.36■■□□□ 1.33
NEDD8-201ENST00000250495 DBR1Q9UK59 544 aaKnown RBP23.36■■□□□ 1.33
NEDD8-201ENST00000250495 PRG3Q9Y2Y8 225 aaPredicted RBP23.36■■□□□ 1.33
NEDD8-201ENST00000250495 HES2Q9Y543 173 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 TRIOO75962 3097 aa23.36■■□□□ 1.33
NEDD8-201ENST00000250495 C2CD4DB7Z1M9 353 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 URODP06132 367 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 CNPP09543 421 aaKnown RBP23.35■■□□□ 1.33
NEDD8-201ENST00000250495 WEE2P0C1S8 567 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 MLH1P40692 756 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 SLC27A1Q6PCB7 646 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 ALYREFQ86V81 257 aaKnown RBP23.35■■□□□ 1.33
NEDD8-201ENST00000250495 CCDC83Q8IWF9 413 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 PLCD3Q8N3E9 789 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 COLEC11Q9BWP8 271 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 APOL6Q9BWW8 343 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 FOXP1Q9H334 677 aaPredicted RBP23.35■■□□□ 1.33
NEDD8-201ENST00000250495 SFXN1Q9H9B4 322 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 MIOSQ9NXC5 875 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 USTQ9Y2C2 406 aa23.35■■□□□ 1.33
NEDD8-201ENST00000250495 A0A1B0GUA9 196 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 LRRIQ4A6NIV6 560 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 SCNN1GP51170 649 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 CLCN4P51793 760 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 DSC1Q08554 894 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 KANK3Q6NY19 840 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 TMC5Q6UXY8 1006 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 MAEAQ7L5Y9 396 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 UBALD2Q8IYN6 164 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 KREMEN2Q8NCW0 462 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 ASIC4Q96FT7 647 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 PRIMPOLQ96LW4 560 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 ZSCAN31Q96LW9 406 aaPredicted RBP23.34■■□□□ 1.33
NEDD8-201ENST00000250495 HERC2P3Q9BVR0 1158 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 PRMT7Q9NVM4 692 aaPredicted RBP23.34■■□□□ 1.33
NEDD8-201ENST00000250495 MARCH5Q9NX47 278 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 SORCS3Q9UPU3 1222 aa23.34■■□□□ 1.33
NEDD8-201ENST00000250495 PIEZO1Q92508 2521 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 MED24O75448 989 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 RPA1P27694 616 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 HMGN5P82970 282 aaKnown RBP23.33■■□□□ 1.33
NEDD8-201ENST00000250495 ZNF174Q15697 407 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 GPR149Q86SP6 731 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 ZBTB8OSQ8IWT0 167 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 ZDHHC14Q8IZN3 488 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 TDRD5Q8NAT2 981 aaKnown RBP23.33■■□□□ 1.33
NEDD8-201ENST00000250495 ZFP42Q96MM3 310 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 RPS6KC1Q96S38 1066 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 NXF3Q9H4D5 531 aaKnown RBP23.33■■□□□ 1.33
NEDD8-201ENST00000250495 GPRC5CQ9NQ84 441 aa23.33■■□□□ 1.33
NEDD8-201ENST00000250495 DPP7Q9UHL4 492 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms