RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 DKC1O60832 514 aaKnown RBP eCLIP23.68■■□□□ 1.38
RNF39-201ENST00000244360 TMEM132BQ14DG7 1078 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 EMC10Q5UCC4 262 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 CASKIN2Q8WXE0 1202 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 IFT81Q8WYA0 676 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 ARL8AQ96BM9 186 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 AMFRQ9UKV5 643 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 WDR81Q562E7 1941 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 TMCO5BA8MYB1 307 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 SNRNP35Q16560 246 aaKnown RBP23.67■■□□□ 1.38
RNF39-201ENST00000244360 CBWD2Q8IUF1 395 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 BCAS4Q8TDM0 211 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 BSNDQ8WZ55 320 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 ARHGEF26Q96DR7 871 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 PLEKHA4Q9H4M7 779 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 PDLIM7Q9NR12 457 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 GABBR1Q9UBS5 961 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 BCS1LQ9Y276 419 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 ARID2Q68CP9 1835 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 CCDC169A6NNP5 214 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 CCDC188H7C350 402 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 RTP1P59025 263 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 CUL1Q13616 776 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 KDM7AQ6ZMT4 941 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 SLC20A1Q8WUM9 679 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 CDHR1Q96JP9 859 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 FBXL18Q96ME1 805 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 CYP39A1Q9NYL5 469 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 COQ4Q9Y3A0 265 aa23.67■■□□□ 1.38
RNF39-201ENST00000244360 ZNF541Q9H0D2 1346 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 STAM2O75886 525 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 CNGA1P29973 690 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 ANGEL2Q5VTE6 544 aaKnown RBP23.66■■□□□ 1.38
RNF39-201ENST00000244360 CATSPERGQ6ZRH7 1159 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 TEX13BQ9BXU2 312 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 THAP2Q9H0W7 228 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 ISCUQ9H1K1 167 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 TAF1DQ9H5J8 278 aaPredicted RBP23.66■■□□□ 1.38
RNF39-201ENST00000244360 KMT5AQ9NQR1 393 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 LOC285556D6RIA3 1793 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 PFASO15067 1338 aa23.66■■□□□ 1.38
RNF39-201ENST00000244360 A0A087WUV0 522 aaPredicted RBP23.65■■□□□ 1.38
RNF39-201ENST00000244360 ESYT3A0FGR9 886 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 DENND3A2RUS2 1198 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 PSAPP07602 524 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 ABCB4P21439 1286 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 HSPA9P38646 679 aaKnown RBP23.65■■□□□ 1.38
RNF39-201ENST00000244360 CCT5P48643 541 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 PTPROQ16827 1216 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 KLHL7Q8IXQ5 586 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 FAM71AQ8IYT1 594 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 TMC2Q8TDI7 906 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 CEP170P1Q96L14 293 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 KIFC3Q9BVG8 833 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 DIS3Q9Y2L1 958 aaKnown RBP23.65■■□□□ 1.38
RNF39-201ENST00000244360 KIAA1217Q5T5P2 1943 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 GOLGA8IPA6NC78 632 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 GOLGA8JA6NMD2 632 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 DDX3YO15523 660 aaKnown RBP23.65■■□□□ 1.38
RNF39-201ENST00000244360 ZEB2O60315 1214 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 ENPEPQ07075 957 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 NOL9Q5SY16 702 aaKnown RBP23.65■■□□□ 1.38
RNF39-201ENST00000244360 SLC39A4Q6P5W5 647 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 RHOT2Q8IXI1 618 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 PARD3BQ8TEW8 1205 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 KLRG1Q96E93 195 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 ACAD9Q9H845 621 aa23.65■■□□□ 1.38
RNF39-201ENST00000244360 JPH1Q9HDC5 661 aaPredicted RBP23.65■■□□□ 1.38
RNF39-201ENST00000244360 A1CFQ9NQ94 594 aaKnown RBP23.65■■□□□ 1.38
RNF39-201ENST00000244360 MYPNQ86TC9 1320 aa23.64■■□□□ 1.38
RNF39-201ENST00000244360 CPP00450 1065 aa23.64■■□□□ 1.38
RNF39-201ENST00000244360 FAM153BP0C7A2 387 aa23.64■■□□□ 1.38
RNF39-201ENST00000244360 FAM153CQ494X1 144 aa23.64■■□□□ 1.38
RNF39-201ENST00000244360 TRMT1LQ7Z2T5 733 aaKnown RBP23.64■■□□□ 1.38
RNF39-201ENST00000244360 MCPH1Q8NEM0 835 aa23.64■■□□□ 1.38
RNF39-201ENST00000244360 MFSD14AQ96MC6 490 aa23.64■■□□□ 1.38
RNF39-201ENST00000244360 FAM153AQ9UHL3 310 aa23.64■■□□□ 1.38
RNF39-201ENST00000244360 NOCTQ9UK39 431 aaKnown RBP23.64■■□□□ 1.38
RNF39-201ENST00000244360 SSC5DA1L4H1 1573 aa23.64■■□□□ 1.37
RNF39-201ENST00000244360 ATXN2Q99700 1313 aaKnown RBP23.64■■□□□ 1.37
RNF39-201ENST00000244360 HMGB1P1B2RPK0 211 aaPredicted RBP23.64■■□□□ 1.37
RNF39-201ENST00000244360 LRIG3Q6UXM1 1119 aa23.64■■□□□ 1.37
RNF39-201ENST00000244360 SPATS2Q86XZ4 545 aaKnown RBP23.64■■□□□ 1.37
RNF39-201ENST00000244360 SHC3Q92529 594 aa23.64■■□□□ 1.37
RNF39-201ENST00000244360 KAT5Q92993 513 aa23.64■■□□□ 1.37
RNF39-201ENST00000244360 KREMEN1Q96MU8 473 aa23.64■■□□□ 1.37
RNF39-201ENST00000244360 TMEM8AQ9HCN3 771 aa23.64■■□□□ 1.37
RNF39-201ENST00000244360 SEPT11Q9NVA2 429 aaKnown RBP23.64■■□□□ 1.37
RNF39-201ENST00000244360 COG5Q9UP83 839 aa23.64■■□□□ 1.37
RNF39-201ENST00000244360 CD2APQ9Y5K6 639 aa23.64■■□□□ 1.37
RNF39-201ENST00000244360 ZNF233A6NK53 670 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 SPATA31C2B4DYI2 1134 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 DGAT1O75907 488 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 GTF2H1P32780 548 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 GPC3P51654 580 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 ERVK-9P63128 1117 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 TTC31Q49AM3 519 aaPredicted RBP23.63■■□□□ 1.37
RNF39-201ENST00000244360 PRAMEF18Q5VWM3 479 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 KRT39Q6A163 491 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 EPS8L1Q8TE68 723 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms