RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 ZNF131P52739 623 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 LRRC63Q05C16 580 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 LONRF1Q17RB8 773 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 FNBP1Q96RU3 617 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 IWS1Q96ST2 819 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 KIAA1024Q9UPX6 916 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 CLIC2O15247 247 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 TNFRSF8P28908 595 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 CTCFP49711 727 aaPredicted RBP12.34□□□□□ -0.43
CCND1-201ENST00000227507 SLC8A3P57103 927 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 CENPPQ6IPU0 288 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 SYCE1Q8N0S2 351 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 TNFRSF25Q93038 417 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 ZCWPW1Q9H0M4 648 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 CFAP73A6NFT4 308 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 MGRN1O60291 552 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 TLR2O60603 784 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 STXBP2Q15833 593 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 GUF1Q8N442 669 aaKnown RBP12.34□□□□□ -0.43
CCND1-201ENST00000227507 CERS5Q8N5B7 392 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 NLGN2Q8NFZ4 835 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 DEPTORQ8TB45 409 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 GPRC5DQ9NZD1 345 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 GAKO14976 1311 aa12.34□□□□□ -0.43
CCND1-201ENST00000227507 CALUO43852 315 aaPredicted RBP12.33□□□□□ -0.43
CCND1-201ENST00000227507 DNAJC8O75937 253 aaPredicted RBP12.33□□□□□ -0.43
CCND1-201ENST00000227507 XRCC5P13010 732 aaKnown RBP12.33□□□□□ -0.43
CCND1-201ENST00000227507 TNFAIP3P21580 790 aa12.33□□□□□ -0.43
CCND1-201ENST00000227507 RPS6KA3P51812 740 aa12.33□□□□□ -0.43
CCND1-201ENST00000227507 GJB7Q6PEY0 223 aa12.33□□□□□ -0.43
CCND1-201ENST00000227507 SLC30A9Q6PML9 568 aa12.33□□□□□ -0.43
CCND1-201ENST00000227507 ERO1BQ86YB8 467 aa12.33□□□□□ -0.43
CCND1-201ENST00000227507 ATL2Q8NHH9 583 aa12.33□□□□□ -0.43
CCND1-201ENST00000227507 C7orf25Q9BPX7 421 aa12.33□□□□□ -0.43
CCND1-201ENST00000227507 LRRC4CQ9HCJ2 640 aa12.33□□□□□ -0.43
CCND1-201ENST00000227507 PRR12Q9ULL5 1215 aa12.33□□□□□ -0.43
CCND1-201ENST00000227507 CCL15-CCL14A0A0B4J2E2 113 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 ARHGAP4P98171 946 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 CCL15Q16663 113 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 MAP1SQ66K74 1059 aaPredicted RBP12.33□□□□□ -0.44
CCND1-201ENST00000227507 GLYCTKQ8IVS8 523 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 MAGEF1Q9HAY2 307 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 USP15Q9Y4E8 981 aaPredicted RBP12.33□□□□□ -0.44
CCND1-201ENST00000227507 PJA2O43164 708 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 LRRN2O75325 713 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 LUC7L3O95232 432 aaKnown RBP12.33□□□□□ -0.44
CCND1-201ENST00000227507 TDP2O95551 362 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 CETPP11597 493 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 PECAM1P16284 738 aaPredicted RBP12.33□□□□□ -0.44
CCND1-201ENST00000227507 KCNMA1Q12791 1236 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 ERMARDQ5T6L9 678 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 GBA2Q9HCG7 927 aaPredicted RBP12.33□□□□□ -0.44
CCND1-201ENST00000227507 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■□□□ 12.5
CCND1-201ENST00000227507 SCN11AQ9UI33 1791 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 GGA2Q9UJY4 613 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 FOXO6A8MYZ6 492 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 PYGLP06737 847 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 STAT1P42224 750 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 POLGP54098 1239 aaPredicted RBP12.33□□□□□ -0.44
CCND1-201ENST00000227507 ANKRD20A2Q5SQ80 823 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 C6orf118Q5T5N4 469 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 ANKRD20A1Q5TYW2 823 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 ANKRD20A3Q5VUR7 823 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 MIS18BP1Q6P0N0 1132 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
CCND1-201ENST00000227507 RMI1Q9H9A7 625 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 OSGEPQ9NPF4 335 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 INTUQ9ULD6 942 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 AGAP1Q9UPQ3 857 aa12.33□□□□□ -0.44
CCND1-201ENST00000227507 E9PMD0 336 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 SPOPO43791 374 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 GJC1P36383 396 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 MSH2P43246 934 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 MESDQ14696 234 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 ZRSR2Q15696 482 aaKnown RBP12.32□□□□□ -0.44
CCND1-201ENST00000227507 GRIK5Q16478 980 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 TSNAXIP1Q2TAA8 658 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 ZBTB8OSQ8IWT0 167 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 LRRC15Q8TF66 581 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 NAP1L3Q99457 506 aaPredicted RBP12.32□□□□□ -0.44
CCND1-201ENST00000227507 PARK7Q99497 189 aaKnown RBP12.32□□□□□ -0.44
CCND1-201ENST00000227507 RRAGCQ9HB90 399 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 RIC8AQ9NPQ8 531 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 KRT16P08779 473 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 CCND1P24385 295 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 KCNJ1P48048 391 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 HGSNATQ68CP4 663 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 ZNF571Q7Z3V5 609 aaPredicted RBP12.32□□□□□ -0.44
CCND1-201ENST00000227507 FAM178BQ8IXR5 827 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 TRIM4Q9C037 500 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 EMILIN3Q9NT22 766 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 H0YCG3 227 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 MEIS1O00470 390 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 RTN2O75298 545 aa12.32□□□□□ -0.44
CCND1-201ENST00000227507 GNAT1P11488 350 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms