RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 MYCLP12524 364 aaPredicted RBP23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 GBP1P32455 592 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 DRG2P55039 364 aaKnown RBP23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 DMP1Q13316 513 aaPredicted RBP23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 FAM102BQ5T8I3 360 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 AGBL2Q5U5Z8 902 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 ARHGEF16Q5VV41 709 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 KRT39Q6A163 491 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 DDX42Q86XP3 938 aaKnown RBP eCLIP23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 TMEM161BQ8NDZ6 487 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 BCAS4Q8TDM0 211 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 SHC3Q92529 594 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 NTPCRQ9BSD7 190 aaKnown RBP23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 MOV10L1Q9BXT6 1211 aaKnown RBP23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 WNT8AQ9H1J5 351 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 TMEM8AQ9HCN3 771 aa23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 NOCTQ9UK39 431 aaKnown RBP23.7■■□□□ 1.39
SMARCD2-201ENST00000225742 EBAG9O00559 213 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 CCNE2O96020 404 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 CCND2P30279 289 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 ABCD1P33897 745 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 CORO7P57737 925 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 UAP1Q16222 522 aaPredicted RBP23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 SNRNP35Q16560 246 aaKnown RBP23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 KCTD16Q68DU8 428 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 NLRX1Q86UT6 975 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 SH2D3CQ8N5H7 860 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 NEUROG2Q9H2A3 272 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 RASSF4Q9H2L5 321 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 HOMER2Q9NSB8 354 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 RASAL2Q9UJF2 1139 aa23.7■■□□□ 1.38
SMARCD2-201ENST00000225742 ADRB2P07550 413 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 CHRNB2P17787 502 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 VCAM1P19320 739 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 GPC3P51654 580 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 DR1Q01658 176 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 EPS8L1Q8TE68 723 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 FAM81BQ96LP2 452 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 MFSD14AQ96MC6 490 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 FBXL18Q96ME1 805 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 MAF1Q9H063 256 aa23.69■■□□□ 1.38
SMARCD2-201ENST00000225742 TULP1O00294 542 aaPredicted RBP23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 RPS12P25398 132 aaKnown RBP23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 CTNNA1P35221 906 aaKnown RBP23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 RTP1P59025 263 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 TMC3Q7Z5M5 1100 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 SPATS2Q86XZ4 545 aaKnown RBP23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 RUNDC3BQ96NL0 473 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 ZSWIM1Q9BR11 485 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 ERP44Q9BS26 406 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 RPAP3Q9H6T3 665 aaPredicted RBP23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 PCDHA10Q9Y5I2 948 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 PARP14Q460N5 1801 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 ATP9AO75110 1047 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 PPFIA2O75334 1257 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 CYP1A2P05177 515 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 CHRNA3P32297 505 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 NPTX2P47972 431 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 OAZ1P54368 228 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 SLC20A2Q08357 652 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 PRPF4BQ13523 1007 aaKnown RBP23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 DUPD1Q68J44 220 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 VSIG10LQ86VR7 867 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 PARD3BQ8TEW8 1205 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 GPRC5CQ9NQ84 441 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 KMT5AQ9NQR1 393 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 KCNG1Q9UIX4 513 aa23.68■■□□□ 1.38
SMARCD2-201ENST00000225742 CCDC169A6NNP5 214 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 H0YCG3 227 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 VWA5AO00534 786 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 PHF2O75151 1096 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 SGPL1O95470 568 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 EIF3BP55884 814 aaKnown RBP23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 EN1Q05925 392 aaPredicted RBP23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 B4GALNT4Q76KP1 1039 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 ENOSF1Q7L5Y1 443 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 NOP9Q86U38 636 aaKnown RBP23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 ALG3Q92685 438 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 ATP6V0A1Q93050 837 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 KREMEN1Q96MU8 473 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 NT5C1BQ96P26 610 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 PCDHB18PQ96TA0 734 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 UVRAGQ9P2Y5 699 aa23.67■■□□□ 1.38
SMARCD2-201ENST00000225742 ANKRD63C9JTQ0 380 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 CTNNA2P26232 953 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 CNGA1P29973 690 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 ADSSP30520 456 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 USP8P40818 1118 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 MAGEA9P43362 315 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 CCT5P48643 541 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 ZNF844Q08AG5 666 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 PDCLQ13371 301 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 CBWD2Q8IUF1 395 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 JDP2Q8WYK2 163 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 TXLNGYQ9BZA5 131 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 CELF4Q9BZC1 486 aaKnown RBP23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 EPN3Q9H201 632 aa23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 ATXN2Q99700 1313 aaKnown RBP23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 TESPA1A2RU30 521 aaPredicted RBP23.66■■□□□ 1.38
SMARCD2-201ENST00000225742 DENND3A2RUS2 1198 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms