RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 KCNG1Q9UIX4 513 aa18.06■□□□□ 0.48
LIM2-201ENST00000221973 COL4A6Q14031 1691 aa18.06■□□□□ 0.48
LIM2-201ENST00000221973 K7ENM7 598 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 BIN1O00499 593 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 CSDE1O75534 798 aaKnown RBP18.05■□□□□ 0.48
LIM2-201ENST00000221973 SARSP49591 514 aaKnown RBP18.05■□□□□ 0.48
LIM2-201ENST00000221973 PTENP60484 403 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 EHHADHQ08426 723 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 KCNB1Q14721 858 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 ZBTB8OSQ8IWT0 167 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 TMEM40Q8WWA1 233 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 GSDMAQ96QA5 445 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 FIZ1Q96SL8 496 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 NTPCRQ9BSD7 190 aaKnown RBP18.05■□□□□ 0.48
LIM2-201ENST00000221973 FGFBP2Q9BYJ0 223 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 GCOM2Q9BZD3 368 aaPredicted RBP18.05■□□□□ 0.48
LIM2-201ENST00000221973 SLC39A2Q9NP94 309 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 RMND1Q9NWS8 449 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 MAN1B1Q9UKM7 699 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 KAT6AQ92794 2004 aa18.05■□□□□ 0.48
LIM2-201ENST00000221973 INO80B-WBP1J3KQ70 363 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 RHOBTB3O94955 611 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 GCNT3O95395 438 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 MYBP10242 640 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 NCKAP1LP55160 1127 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 POU5F1BQ06416 359 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 NT5DC1Q5TFE4 455 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 CDCA2Q69YH5 1023 aaPredicted RBP18.04■□□□□ 0.48
LIM2-201ENST00000221973 HAUS6Q7Z4H7 955 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 TMEM161BQ8NDZ6 487 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 GLIS3Q8NEA6 775 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 INO80BQ9C086 356 aaPredicted RBP18.04■□□□□ 0.48
LIM2-201ENST00000221973 C2orf40Q9H1Z8 148 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 MINDY3Q9H8M7 445 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 OLFML3Q9NRN5 406 aa18.04■□□□□ 0.48
LIM2-201ENST00000221973 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.03■□□□□ 0.48
LIM2-201ENST00000221973 DENND3A2RUS2 1198 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 MAPTP10636 758 aaKnown RBP18.03■□□□□ 0.48
LIM2-201ENST00000221973 GHRP10912 638 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 DARSP14868 501 aaKnown RBP18.03■□□□□ 0.48
LIM2-201ENST00000221973 FGFR4P22455 802 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 EIF4BP23588 611 aaKnown RBP18.03■□□□□ 0.48
LIM2-201ENST00000221973 CASP5P51878 434 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 STK4Q13043 487 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 PSMD2Q13200 908 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 ZC2HC1CQ53FD0 456 aaPredicted RBP18.03■□□□□ 0.48
LIM2-201ENST00000221973 ZNF720Q7Z2F6 126 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 SRGAP1Q7Z6B7 1085 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 FBXO22Q8NEZ5 403 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 NFKBIZQ9BYH8 718 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 ARHGAP28Q9P2N2 729 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 GDAQ9Y2T3 454 aa18.03■□□□□ 0.48
LIM2-201ENST00000221973 H0YCG3 227 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 K7ERI5 159 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 LINC00271P0C7V0 271 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 COL9A1P20849 921 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 EFNA5P52803 228 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 MBTD1Q05BQ5 628 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 LPIN1Q14693 890 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 EPC2Q52LR7 807 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 FBXO47Q5MNV8 452 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 RBM43Q6ZSC3 357 aaKnown RBP18.02■□□□□ 0.48
LIM2-201ENST00000221973 IFNLR1Q8IU57 520 aaPredicted RBP18.02■□□□□ 0.48
LIM2-201ENST00000221973 KIAA0895Q8NCT3 520 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 APBB2Q92870 758 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 IFIH1Q9BYX4 1025 aaKnown RBP18.02■□□□□ 0.48
LIM2-201ENST00000221973 RAPGEFL1Q9UHV5 662 aa18.02■□□□□ 0.48
LIM2-201ENST00000221973 NOC2LQ9Y3T9 749 aaKnown RBP18.02■□□□□ 0.48
LIM2-201ENST00000221973 EVPLQ92817 2033 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 RPS6KA5O75582 802 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 PRPF6O94906 941 aaKnown RBP18.01■□□□□ 0.47
LIM2-201ENST00000221973 UPP2O95045 317 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 GTF2BQ00403 316 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 MORC3Q14149 939 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 MAPK6Q16659 721 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 ZNF658Q5TYW1 1059 aaPredicted RBP18.01■□□□□ 0.47
LIM2-201ENST00000221973 STXBP4Q6ZWJ1 553 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 TAS1R3Q7RTX0 852 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 SMYD4Q8IYR2 804 aaPredicted RBP18.01■□□□□ 0.47
LIM2-201ENST00000221973 CCDC113Q9H0I3 377 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 ST6GALNAC4Q9H4F1 302 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 TMEM134Q9H6X4 195 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 UBE2ZQ9H832 354 aaPredicted RBP18.01■□□□□ 0.47
LIM2-201ENST00000221973 AGO3Q9H9G7 860 aaKnown RBP18.01■□□□□ 0.47
LIM2-201ENST00000221973 RC3H2Q9HBD1 1191 aaKnown RBP18.01■□□□□ 0.47
LIM2-201ENST00000221973 MAPK8IP1Q9UQF2 711 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 PCDHB13Q9Y5F0 798 aa18.01■□□□□ 0.47
LIM2-201ENST00000221973 PHLPP2Q6ZVD8 1323 aa18■□□□□ 0.47
LIM2-201ENST00000221973 H3BNC9 293 aa18■□□□□ 0.47
LIM2-201ENST00000221973 PPP1R37O75864 691 aa18■□□□□ 0.47
LIM2-201ENST00000221973 PRKCBP05771 671 aa18■□□□□ 0.47
LIM2-201ENST00000221973 NFX1Q12986 1120 aaKnown RBP18■□□□□ 0.47
LIM2-201ENST00000221973 STRN3Q13033 797 aa18■□□□□ 0.47
LIM2-201ENST00000221973 EPM2AIP1Q7L775 607 aaPredicted RBP18■□□□□ 0.47
LIM2-201ENST00000221973 CATSPER4Q7RTX7 472 aa18■□□□□ 0.47
LIM2-201ENST00000221973 FAM228AQ86W67 206 aa18■□□□□ 0.47
LIM2-201ENST00000221973 KHSRPQ92945 711 aaKnown RBP eCLIP18■□□□□ 0.47
LIM2-201ENST00000221973 MRPL38Q96DV4 380 aaKnown RBP18■□□□□ 0.47
LIM2-201ENST00000221973 YME1L1Q96TA2 773 aa18■□□□□ 0.47
LIM2-201ENST00000221973 STRA6Q9BX79 667 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms