RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 HMGB1P1B2RPK0 211 aaPredicted RBP15.77■□□□□ 0.11
CNOT3-201ENST00000221232 CHRNB2P17787 502 aa15.77■□□□□ 0.11
CNOT3-201ENST00000221232 ADSSP30520 456 aa15.77■□□□□ 0.11
CNOT3-201ENST00000221232 GPC5P78333 572 aa15.77■□□□□ 0.11
CNOT3-201ENST00000221232 PTGISQ16647 500 aa15.77■□□□□ 0.11
CNOT3-201ENST00000221232 CD302Q8IX05 232 aa15.77■□□□□ 0.11
CNOT3-201ENST00000221232 TATDN2Q93075 761 aa15.77■□□□□ 0.11
CNOT3-201ENST00000221232 CCT8L2Q96SF2 557 aa15.77■□□□□ 0.11
CNOT3-201ENST00000221232 TSPYL1Q9H0U9 437 aa15.77■□□□□ 0.11
CNOT3-201ENST00000221232 RIPK3Q9Y572 518 aa15.77■□□□□ 0.11
CNOT3-201ENST00000221232 NCANO14594 1321 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 SPOPO43791 374 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 PYGMP11217 842 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 KRT5P13647 590 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 DPEP1P16444 411 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 MTMR2Q13614 643 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 SNRNP35Q16560 246 aaKnown RBP15.76■□□□□ 0.11
CNOT3-201ENST00000221232 ARHGEF16Q5VV41 709 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 LLGL2Q6P1M3 1020 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 SLC9A9Q8IVB4 645 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 FBXO25Q8TCJ0 367 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 ATP8B4Q8TF62 1192 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 EPN3Q9H201 632 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 GOLGA6L10A0A0M3HER8 536 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 DENND3A2RUS2 1198 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 POU5F1Q01860 360 aaKnown RBP15.76■□□□□ 0.11
CNOT3-201ENST00000221232 CXCL9Q07325 125 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 DAB2IPQ5VWQ8 1189 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 TAS1R2Q8TE23 839 aa15.76■□□□□ 0.11
CNOT3-201ENST00000221232 ZNF473Q8WTR7 871 aaKnown RBP15.76■□□□□ 0.11
CNOT3-201ENST00000221232 CNGA1P29973 690 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 SLCO1A2P46721 670 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 PTENP60484 403 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 SNX1Q13596 522 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 PGM5Q15124 567 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 TTC31Q49AM3 519 aaPredicted RBP15.75■□□□□ 0.11
CNOT3-201ENST00000221232 NLRP14Q86W24 1093 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 CCDC25Q86WR0 208 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 JAMLQ86YT9 394 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 KCTD17Q8N5Z5 321 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 ERP44Q9BS26 406 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 UBIAD1Q9Y5Z9 338 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 MYH11P35749 1972 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 UBE4BO95155 1302 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 NPTX2P47972 431 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 BAATQ14032 418 aaPredicted RBP15.75■□□□□ 0.11
CNOT3-201ENST00000221232 TTC27Q6P3X3 843 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 EPS8L1Q8TE68 723 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 BSNDQ8WZ55 320 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 NUP85Q9BW27 656 aa15.75■□□□□ 0.11
CNOT3-201ENST00000221232 PPP1R1BQ9UD71 204 aaPredicted RBP15.75■□□□□ 0.11
CNOT3-201ENST00000221232 CAND2O75155 1236 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 VCAM1P19320 739 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 IFT88Q13099 833 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 FBXW10Q5XX13 1052 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 RNF207Q6ZRF8 634 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 NIM1KQ8IY84 436 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 PRELID2Q8N945 189 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 POMGNT1Q8WZA1 660 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 ZNF653Q96CK0 615 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 CEP170P1Q96L14 293 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 TRIM7Q9C029 511 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 CARD9Q9H257 536 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 FAM114A2Q9NRY5 505 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 TRPC6Q9Y210 931 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 ATP2C2O75185 946 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 ANO5Q75V66 913 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 TADA2BQ86TJ2 420 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 RHOT2Q8IXI1 618 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 CCDC105Q8IYK2 499 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 UBL4BQ8N7F7 174 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 KMT5AQ9NQR1 393 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 DNAJC17Q9NVM6 304 aaKnown RBP15.74■□□□□ 0.11
CNOT3-201ENST00000221232 GABBR1Q9UBS5 961 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 TBX20Q9UMR3 447 aa15.74■□□□□ 0.11
CNOT3-201ENST00000221232 RTN2O75298 545 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 GTF2BQ00403 316 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 PCNX4Q63HM2 1172 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 CYFIP1Q7L576 1253 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 MCF2L2Q86YR7 1114 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 MYCBPAPQ8TBZ2 947 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 PPM1EQ8WY54 764 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 ATG4CQ96DT6 458 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 BICD1Q96G01 975 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 FAM213AQ9BRX8 229 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 RAB17Q9H0T7 212 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 RPAP3Q9H6T3 665 aaPredicted RBP15.73■□□□□ 0.11
CNOT3-201ENST00000221232 PNMA2Q9UL42 364 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 SYNPO2Q9UMS6 1093 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 ERLIN2O94905 339 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 MUTP22033 750 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 FGFR4P22455 802 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 FMO1Q01740 532 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 DUPD1Q68J44 220 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 SWSAP1Q6NVH7 229 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 CCDC137Q6PK04 289 aaKnown RBP15.73■□□□□ 0.11
CNOT3-201ENST00000221232 SAMD7Q7Z3H4 446 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 EFCAB13Q8IY85 973 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 OTUD6BQ8N6M0 293 aa15.73■□□□□ 0.11
CNOT3-201ENST00000221232 ZNF564Q8TBZ8 553 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms