RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TRAPPC12Q8WVT3 735 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 MCUR1Q96AQ8 359 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 HSPBP1Q9NZL4 362 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 ADAMTS1Q9UHI8 967 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 EMSYQ7Z589 1322 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 SLC15A5A6NIM6 579 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 SOCS7O14512 581 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 TEX33O43247 280 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 BUB1O43683 1085 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 SLITRK3O94933 977 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 BEX3Q00994 111 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 SEMA3FQ13275 785 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 CCDC14Q49A88 953 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 C4orf19Q8IY42 314 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 KCTD17Q8N5Z5 321 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 ACAP3Q96P50 834 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
CCDC113-201ENST00000219299 DNAJC12Q9UKB3 198 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 HPSEQ9Y251 543 aa10.11□□□□□ -0.79
CCDC113-201ENST00000219299 C17orf102A2RUQ5 167 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 RARRES1P49788 294 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 CLUL1Q15846 466 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 DUOXA2Q1HG44 320 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 ZNF699Q32M78 642 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 MAP7D1Q3KQU3 841 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 BEST2Q8NFU1 509 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 PPP1R13LQ8WUF5 828 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 HEXIM2Q96MH2 286 aaKnown RBP10.1□□□□□ -0.79
CCDC113-201ENST00000219299 TEPSINQ96N21 525 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 KBTBD4Q9NVX7 518 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 SYNJ2BP-COX16A0A087WUM0 186 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 SLC26A4O43511 780 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 VTNP04004 478 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 RASSF2P50749 326 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 APBA1Q02410 837 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 CCDC144BQ3MJ40 725 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 KRT39Q6A163 491 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 SLC5A5Q92911 643 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 EXOC4Q96A65 974 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 STARD7Q9NQZ5 370 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 COX16Q9P0S2 106 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 BZW2Q9Y6E2 419 aaKnown RBP10.1□□□□□ -0.79
CCDC113-201ENST00000219299 IGSF9BQ9UPX0 1349 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 GOLGA8SH3BPF8 625 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 CEP104O60308 925 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 LUC7L3O95232 432 aaKnown RBP10.1□□□□□ -0.79
CCDC113-201ENST00000219299 PGK1P00558 417 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 CYP3A4P08684 503 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 SLC26A2P50443 739 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 CYP27A1Q02318 531 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 SNCBQ16143 134 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 RSRC2Q7L4I2 434 aaKnown RBP10.1□□□□□ -0.79
CCDC113-201ENST00000219299 NIPA1Q7RTP0 329 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 ANKRD23Q86SG2 305 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 ATP8B4Q8TF62 1192 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 PDE11AQ9HCR9 933 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 PRMT7Q9NVM4 692 aaPredicted RBP10.1□□□□□ -0.79
CCDC113-201ENST00000219299 HAUS2Q9NVX0 235 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 CNTNAP1P78357 1384 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 IQSEC1Q6DN90 963 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 BRI3BPQ8WY22 251 aa10.1□□□□□ -0.79
CCDC113-201ENST00000219299 ARHGEF2Q92974 986 aaKnown RBP10.1□□□□□ -0.79
CCDC113-201ENST00000219299 KRT71Q3SY84 523 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 ZNF484Q5JVG2 852 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 ATF7IP2Q5U623 682 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 RNF168Q8IYW5 571 aaPredicted RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 UBL4BQ8N7F7 174 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 HAS1Q92839 578 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 PPANQ9NQ55 473 aaKnown RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 SPATS2LQ9NUQ6 558 aaKnown RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 JRKLQ9Y4A0 524 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 LAMB4A4D0S4 1761 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 A0A0G2JLL6 359 aaPredicted RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 NKRFO15226 690 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 GAS8O95995 478 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 RPS6KA1Q15418 735 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 SH2D4BQ5SQS7 431 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 PRRT2Q7Z6L0 340 aaPredicted RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 GBP5Q96PP8 586 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 RAB3IPQ96QF0 476 aaPredicted RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 HUS1O60921 280 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 NPTX2P47972 431 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 GIT2Q14161 759 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 RBBP5Q15291 538 aaKnown RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 SNRNP35Q16560 246 aaKnown RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 KIAA1755Q5JYT7 1200 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 GKAP1Q5VSY0 366 aaPredicted RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 CXCL17Q6UXB2 119 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 FAM81BQ96LP2 452 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 ARHGEF37A1IGU5 675 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 NDC80O14777 642 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 EIF4A3P38919 411 aaKnown RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 FSCN1Q16658 493 aaKnown RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 SEZ6Q53EL9 994 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 NOL9Q5SY16 702 aaKnown RBP10.09□□□□□ -0.79
CCDC113-201ENST00000219299 CCDC62Q6P9F0 684 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 TMEM270Q6UE05 265 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 MTMR9Q96QG7 549 aa10.09□□□□□ -0.79
CCDC113-201ENST00000219299 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
CCDC113-201ENST00000219299 PHF20L1A8MW92 1017 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms