RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NELFBQ8WX92 580 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 SEPT8Q92599 483 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 ZBTB45Q96K62 511 aaPredicted RBP29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 DNAJC25Q9H1X3 360 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 SEMA6BQ9H3T3 888 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 DACH1Q9UI36 760 aa29.85■■■□□ 2.37
CHMP4B-201ENST00000217402 AXLP30530 894 aa29.84■■■□□ 2.37
CHMP4B-201ENST00000217402 MATR3P43243 847 aaKnown RBP eCLIP29.84■■■□□ 2.371e-6■■■□□ 18.3
CHMP4B-201ENST00000217402 HS2ST1Q7LGA3 356 aa29.84■■■□□ 2.37
CHMP4B-201ENST00000217402 DHTKD1Q96HY7 919 aaPredicted RBP29.84■■■□□ 2.37
CHMP4B-201ENST00000217402 TCHPQ9BT92 498 aa29.84■■■□□ 2.37
CHMP4B-201ENST00000217402 TNFSF13BQ9Y275 285 aa29.84■■■□□ 2.37
CHMP4B-201ENST00000217402 NR2E3Q9Y5X4 410 aa29.84■■■□□ 2.37
CHMP4B-201ENST00000217402 TRIM49BA6NDI0 452 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 TOM1L1O75674 476 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 HARSP12081 509 aaKnown RBP29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 PMS1P54277 932 aaKnown RBP29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 STX17P56962 302 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 PAK1Q13153 545 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 TCTN1Q2MV58 587 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 ZNF568Q3ZCX4 644 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 ANO6Q4KMQ2 910 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 ZBTB33Q86T24 672 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 P2RX5Q93086 422 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 VWCEQ96DN2 955 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 AGPAT3Q9NRZ7 376 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 TYW1Q9NV66 732 aaKnown RBP29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 LTBP2Q14767 1821 aa29.83■■■□□ 2.37
CHMP4B-201ENST00000217402 A0A1B0GUA9 196 aa29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 N4BP3O15049 544 aa29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 MGEA5O60502 916 aa29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 ZSCAN20P17040 1043 aaPredicted RBP29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 FPGSQ05932 587 aa29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 TWF2Q6IBS0 349 aaKnown RBP29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 CLIC2O15247 247 aa29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 ACRP10323 421 aa29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 MPZL3Q6UWV2 235 aa29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 CHST12Q9NRB3 414 aa29.82■■■□□ 2.36
CHMP4B-201ENST00000217402 TET1Q8NFU7 2136 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 PDXKO00764 312 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 CLDN3O15551 220 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 CCNE1P24864 410 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 ADSSP30520 456 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 CENPPQ6IPU0 288 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 ARMCX5Q6P1M9 558 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 SLC27A1Q6PCB7 646 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 POMGNT1Q8WZA1 660 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 APBB2Q92870 758 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 ADAM2Q99965 735 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 CBWD1Q9BRT8 395 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 EIF2AQ9BY44 585 aaKnown RBP29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 HAPLN2Q9GZV7 340 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 PTPRHQ9HD43 1115 aa29.81■■■□□ 2.36
CHMP4B-201ENST00000217402 ABLIM1O14639 778 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 NPTXRO95502 500 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 PROZP22891 400 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 PPIGQ13427 754 aaKnown RBP eCLIP29.8■■■□□ 2.365e-16■□□□□ 11.3
CHMP4B-201ENST00000217402 DSC3Q14574 896 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 ZCWPW2Q504Y3 356 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 ANKRD40Q6AI12 368 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 RPUSD2Q8IZ73 545 aaKnown RBP29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 TSG101Q99816 390 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 LBHD1Q9BQE6 289 aaPredicted RBP29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 ADPGKQ9BRR6 497 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 CDT1Q9H211 546 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 PCIF1Q9H4Z3 704 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 IL23AQ9NPF7 189 aa29.8■■■□□ 2.36
CHMP4B-201ENST00000217402 CALUO43852 315 aaPredicted RBP29.79■■■□□ 2.36
CHMP4B-201ENST00000217402 IBSPP21815 317 aaPredicted RBP29.79■■■□□ 2.36
CHMP4B-201ENST00000217402 NOLC1Q14978 699 aaKnown RBP eCLIP29.79■■■□□ 2.36
CHMP4B-201ENST00000217402 CNKSR3Q6P9H4 555 aa29.79■■■□□ 2.36
CHMP4B-201ENST00000217402 GOLGA5Q8TBA6 731 aa29.79■■■□□ 2.36
CHMP4B-201ENST00000217402 LINC01599Q8WXQ3 324 aa29.79■■■□□ 2.36
CHMP4B-201ENST00000217402 CCDC51Q96ER9 411 aa29.79■■■□□ 2.36
CHMP4B-201ENST00000217402 FTHL17Q9BXU8 183 aa29.79■■■□□ 2.36
CHMP4B-201ENST00000217402 TRAF3IP3Q9Y228 551 aa29.79■■■□□ 2.36
CHMP4B-201ENST00000217402 UBXN11Q5T124 520 aa29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 SLFN12LQ6IEE8 588 aa29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 LRSAM1Q6UWE0 723 aa29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 MSTO1Q9BUK6 570 aa29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 TRIM6Q9C030 488 aaPredicted RBP29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 RWDD2AQ9UIY3 292 aa29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 STYXL1Q9Y6J8 313 aa29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 BICDL2A1A5D9 508 aa29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 CYP2J2P51589 502 aa29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 MCL1Q07820 350 aa29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 NOC3LQ8WTT2 800 aaKnown RBP29.78■■■□□ 2.36
CHMP4B-201ENST00000217402 A0A0B4J269 797 aa29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 NR3C1P04150 777 aa29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 PFKMP08237 780 aa29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 ERCC5P28715 1186 aaPredicted RBP29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 SNRPFP62306 86 aaKnown RBP29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 LRRC63Q05C16 580 aa29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 TTI2Q6NXR4 508 aa29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 RTN4RL1Q86UN2 441 aaPredicted RBP29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 SAAL1Q96ER3 474 aa29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 EEF2KMTQ96G04 330 aa29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 MED15Q96RN5 788 aa29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 CGNQ9P2M7 1197 aaKnown RBP29.77■■■□□ 2.36
CHMP4B-201ENST00000217402 GARTP22102 1010 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms