RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 XPO1O14980 1071 aaKnown RBP15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 SYTL3Q4VX76 610 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 VPS50Q96JG6 964 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 USP39Q53GS9 565 aaKnown RBP15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 DDX53Q86TM3 631 aaKnown RBP15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 LRRC49Q8IUZ0 686 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 STON1Q9Y6Q2 735 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 TNKSO95271 1327 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 TTLL1O95922 423 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 ATP6V1C1P21283 382 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 SLFN13Q68D06 897 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 PODNQ7Z5L7 613 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 BBS7Q8IWZ6 715 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 SCFD1Q8WVM8 642 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 PNMA6AP0CW24 399 aaPredicted RBP15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 GUCA1AP43080 201 aaPredicted RBP15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 POTEEQ6S8J3 1075 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 GRAMD1CQ8IYS0 662 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 GDAQ9Y2T3 454 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 IRX1P78414 480 aaPredicted RBP15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 ROR1Q01973 937 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 CAPN10Q9HC96 672 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 GRIN2BQ13224 1484 aa15.44■□□□□ 0.06
SPTLC2-201ENST00000216484 DNALI1O14645 258 aaPredicted RBP15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 SRGAP2O75044 1071 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 GCKRQ14397 625 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 RHOT2Q8IXI1 618 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 CCT7Q99832 543 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 C20orf96Q9NUD7 363 aaPredicted RBP15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 PCDHA4Q9UN74 947 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 KIF23Q02241 960 aaPredicted RBP15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 KIZQ2M2Z5 673 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 BNIPLQ7Z465 357 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 VN1R5Q7Z5H4 357 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 CHSY1Q86X52 802 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 GSPT2Q8IYD1 628 aaKnown RBP15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 TNIP2Q8NFZ5 429 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 ALG13Q9NP73 1137 aaKnown RBP15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 DIS3Q9Y2L1 958 aaKnown RBP15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 PDAP1Q13442 181 aaKnown RBP15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 ZNF699Q32M78 642 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 DPCR1Q3MIW9 517 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 MFSD4BQ5TF39 518 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 MICU2Q8IYU8 434 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 AMNQ9BXJ7 453 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 PGBD4Q96DM1 585 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 SERPINB13Q9UIV8 391 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 TMA7Q9Y2S6 64 aaKnown RBP15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 PIPSLA2A3N6 862 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 BIRC5O15392 142 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 CEBPAP49715 358 aaPredicted RBP15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 NCKAP1LP55160 1127 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 ARHGAP27Q6ZUM4 889 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 TTC13Q8NBP0 860 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 IL17RAQ96F46 866 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 ACAP3Q96P50 834 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 ASMTLO95671 621 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 SCRN1Q12765 414 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 RASGRP4Q8TDF6 673 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 IL1RL2Q9HB29 575 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 ADAM22Q9P0K1 906 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 SNX24Q9Y343 169 aa15.43■□□□□ 0.06
SPTLC2-201ENST00000216484 KRT16P08779 473 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 SLC25A24Q6NUK1 477 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 GLMNQ92990 594 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 KIF2CQ99661 725 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 PSD3Q9NYI0 1048 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 BRAFP15056 766 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 FBXO31Q5XUX0 539 aaPredicted RBP15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 DGKHQ86XP1 1220 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 ZBED8Q8IZ13 594 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 ARF5P84085 180 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 IFNLR1Q8IU57 520 aaPredicted RBP15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 FAM129AQ9BZQ8 928 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 HDHD2Q9H0R4 259 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 MYH8P13535 1937 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 COX10Q12887 443 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 ASPRV1Q53RT3 343 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 SFR1Q86XK3 245 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 RNASE11Q8TAA1 199 aaKnown RBP15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 ARIH1Q9Y4X5 557 aaPredicted RBP15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 SSTR3P32745 418 aaPredicted RBP15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 GTF2H3Q13889 308 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 URGCPQ8TCY9 931 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 THTPAQ9BU02 230 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 NUP85Q9BW27 656 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 GGT7Q9UJ14 662 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 BCS1LQ9Y276 419 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 DENND3A2RUS2 1198 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 KRT73Q86Y46 540 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 CYFIP2Q96F07 1278 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 ADAM21Q9UKJ8 722 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 FYNP06241 537 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 PDIA2Q13087 525 aaKnown RBP15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 WDR11Q9BZH6 1224 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 FOXP1Q9H334 677 aaPredicted RBP15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 FLT4P35916 1363 aa15.42■□□□□ 0.06
SPTLC2-201ENST00000216484 FEN1P39748 380 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms