RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 NOP53Q9NZM5 478 aaKnown RBP14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 SLC9A2Q9UBY0 812 aa14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 ARHGAP26Q9UNA1 814 aa14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 MAGEA9P43362 315 aa14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 EIF3BP55884 814 aaKnown RBP14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 BTBD6Q96KE9 485 aa14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 TTC25Q96NG3 672 aa14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 KIF2CQ99661 725 aa14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 BARHL2Q9NY43 387 aa14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 AURKCQ9UQB9 309 aa14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 SCINQ9Y6U3 715 aa14.46□□□□□ -0.1
TGFBR3-201ENST00000212355 BCORL1Q5H9F3 1711 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 DGKIO75912 1065 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 DCTN3O75935 186 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 GRIN1Q05586 938 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 ARMCX2Q7L311 632 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 ST13P4Q8IZP2 240 aaPredicted RBP14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 SPATA33Q96N06 139 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 IL25Q9H293 177 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 SH3GLB2Q9NR46 395 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 LZTS1Q9Y250 596 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 MROH7-TTC4A0A0A0MT08 1334 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 SYCE1LA8MT33 242 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 KCNN4O15554 427 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 ORC1Q13415 861 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 PARP9Q8IXQ6 854 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 SERPINI1Q99574 410 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 MMTAG2Q9BU76 263 aaKnown RBP14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 SPON2Q9BUD6 331 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 UNC45AQ9H3U1 944 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 NDFIP2Q9NV92 336 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 PODXLO00592 558 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 NUP93Q8N1F7 819 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 SLC35G2Q8TBE7 412 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 TAF1DQ9H5J8 278 aaPredicted RBP14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 RNF146Q9NTX7 359 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 RBAKQ9NYW8 714 aaPredicted RBP14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 POLR1AO95602 1720 aaPredicted RBP14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 HAUS5O94927 633 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 SYF2O95926 243 aaKnown RBP14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 ELF1P32519 619 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 CDH6P55285 790 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 MDM2Q00987 491 aaPredicted RBP14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 STXBP2Q15833 593 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 F5H6K3 240 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 IPO5O00410 1097 aaKnown RBP14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 KLRC3Q07444 240 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 GRM4Q14833 912 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 PLA2G4FQ68DD2 849 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 CCHCR1Q8TD31 782 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 DCAF4Q8WV16 495 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 SHCBP1LQ9BZQ2 653 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 ASNSD1Q9NWL6 643 aa14.45□□□□□ -0.1
TGFBR3-201ENST00000212355 UTYO14607 1347 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 E5RI56 91 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 C2CD6Q53TS8 623 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 HSP90AA5PQ58FG0 334 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 OR6P1Q8NGX9 317 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 ARHGEF1Q92888 912 aaKnown RBP14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 EGFL8Q99944 293 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 CENPKQ9BS16 269 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 ING2Q9H160 280 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 KIF17Q9P2E2 1029 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 FBXO2Q9UK22 296 aaPredicted RBP14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 KRT37O76014 449 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 PDGFRBP09619 1106 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 IL17RAQ96F46 866 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 TTC37Q6PGP7 1564 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 AK9Q5TCS8 1911 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 ERVV-1B6SEH8 477 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 MAP3K6O95382 1288 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 CHEK2O96017 543 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 COA1Q9GZY4 146 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 TMEM60Q9H2L4 133 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 HLA-DPA1P20036 260 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 TAC1P20366 129 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 ARFIP2P53365 341 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 SEZ6Q53EL9 994 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 WDR75Q8IWA0 830 aaKnown RBP14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 SNF8Q96H20 258 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 TMEM117Q9H0C3 514 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 RNF14Q9UBS8 474 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 ZSCAN9O15535 394 aaPredicted RBP14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 CHN1P15882 459 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 P3H1Q32P28 736 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 HEATR6Q6AI08 1181 aaKnown RBP14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 PPP4R3CPQ6ZMV5 832 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.44□□□□□ -0.12e-6■■■■■ 34.5
TGFBR3-201ENST00000212355 ZBED2Q9BTP6 218 aa14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 UPF3AQ9H1J1 476 aaKnown RBP14.44□□□□□ -0.1
TGFBR3-201ENST00000212355 A8MXQ7 604 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 PCSK7Q16549 785 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 LRRC23Q53EV4 343 aaPredicted RBP14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 FAM160B2Q86V87 743 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 PGBD4Q96DM1 585 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 IREB2P48200 963 aaKnown RBP14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 FXR1P51114 621 aaKnown RBP eCLIP14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 PDXDC1Q6P996 788 aa14.43□□□□□ -0.1
TGFBR3-201ENST00000212355 TMA16Q96EY4 203 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms