RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 ZNF543Q08ER8 600 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 NFIAQ12857 509 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 ZNF268Q14587 947 aaPredicted RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 SIX1Q15475 284 aaPredicted RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 GALNTL6Q49A17 601 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 ZNF449Q6P9G9 518 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 ANKS1BQ7Z6G8 1248 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 DEFB132Q7Z7B7 95 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 HOOK3Q86VS8 718 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 CCDC125Q86Z20 511 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 SRRM1Q8IYB3 904 aaKnown RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 PHC3Q8NDX5 983 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 MYO3BQ8WXR4 1341 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 PGM2Q96G03 612 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 C9orf72Q96LT7 481 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 SETDB2Q96T68 719 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 PKD2L1Q9P0L9 805 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 SWAP70Q9UH65 585 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 HAO1Q9UJM8 370 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 TRAF3IP3Q9Y228 551 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 R3HDM2Q9Y2K5 976 aaKnown RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 PCDHA1Q9Y5I3 950 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 MYH11P35749 1972 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 A0A1B0GUA9 196 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 RIMBP2O15034 1052 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 ENTPD5O75356 428 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 SMNDC1O75940 238 aaKnown RBP eCLIP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 SGPL1O95470 568 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 CBX6O95503 412 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 BAG3O95817 575 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 FMO5P49326 533 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 SESN3P58005 492 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 COPS2P61201 443 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 BIRC2Q13490 618 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 FRMD5Q7Z6J6 570 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 SLC47A2Q86VL8 602 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 FAM186BQ8IYM0 893 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 SPDYE1Q8NFV5 336 aaPredicted RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 ETNPPLQ8TBG4 499 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 RSRC1Q96IZ7 334 aaKnown RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 HEMGNQ9BXL5 484 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 ANO3Q9BYT9 981 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 RAB17Q9H0T7 212 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 CNOT10Q9H9A5 744 aaKnown RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 ZBTB12Q9Y330 459 aaPredicted RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 USP15Q9Y4E8 981 aaPredicted RBP6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 KAT6AQ92794 2004 aa6.27□□□□□ -1.41
CEACAM1-201ENST00000161559 LAMA3Q16787 3333 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 PNMA6FA0A0J9YX94 578 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 A0A1B0GVG6 124 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 ESYT2A0FGR8 921 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 SRRM3A6NNA2 597 aaPredicted RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 BANF1O75531 89 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 GNA14O95837 355 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 GCLMP48507 274 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 TCP10Q12799 353 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 BNIP1Q12981 228 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 DNAJC3Q13217 504 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 SEMA3FQ13275 785 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 RRP1BQ14684 758 aaKnown RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 EDRF1Q3B7T1 1238 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 EAPPQ56P03 285 aaPredicted RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 CDCA2Q69YH5 1023 aaPredicted RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 MIS18BP1Q6P0N0 1132 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 TPH2Q8IWU9 490 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 MYCT1Q8N699 235 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 GLIS1Q8NBF1 620 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 MAGEC3Q8TD91 643 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 DHX38Q92620 1227 aaKnown RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 PRR11Q96HE9 360 aaPredicted RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 TGS1Q96RS0 853 aaKnown RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 LZTS2Q9BRK4 669 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 DNAJC18Q9H819 358 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 ETNK1Q9HBU6 452 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 UBE2TQ9NPD8 197 aaPredicted RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 KLHL11Q9NVR0 708 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 DPPA5A6NC42 116 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 CCDC169A6NNP5 214 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 PHF2O75151 1096 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 UFL1O94874 794 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 GJB6O95452 261 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 CYP3A4P08684 503 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 PEX5P50542 639 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 ITIH4Q14624 930 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 RFWD3Q6PCD5 774 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 RFX8Q6ZV50 586 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 ASRGL1Q7L266 308 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 ZNF804AQ7Z570 1209 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 RPUSD2Q8IZ73 545 aaKnown RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 TAB3Q8N5C8 712 aaPredicted RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 TBC1D16Q8TBP0 767 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 PLEKHO2Q8TD55 490 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 INTS2Q9H0H0 1204 aaKnown RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 MYLK2Q9H1R3 596 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 METTL5Q9NRN9 209 aaKnown RBP6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 NCANO14594 1321 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 GOLGA8IPA6NC78 632 aa6.26□□□□□ -1.41
CEACAM1-201ENST00000161559 C2orf71A6NGG8 1288 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms