RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 RGS7P49802 495 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 CDH6P55285 790 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 RASIP1Q5U651 963 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 PDLIM2Q96JY6 352 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 TNPO2O14787 897 aaKnown RBP20.04■□□□□ 0.8
MBD3-201ENST00000156825 HSPA4LO95757 839 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 VPS39Q96JC1 886 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 CYTH2Q99418 400 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.04■□□□□ 0.89e-6■■■■■ 27.7
MBD3-201ENST00000156825 SARS2Q9NP81 518 aaKnown RBP20.04■□□□□ 0.8
MBD3-201ENST00000156825 SMARCAL1Q9NZC9 954 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 SUCLA2Q9P2R7 463 aaPredicted RBP20.04■□□□□ 0.8
MBD3-201ENST00000156825 PPARGC1AQ9UBK2 798 aaKnown RBP20.04■□□□□ 0.8
MBD3-201ENST00000156825 PDXKO00764 312 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 SLC8A1P32418 973 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 ZBED8Q8IZ13 594 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 TTC25Q96NG3 672 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 CHORDC1Q9UHD1 332 aaPredicted RBP20.04■□□□□ 0.8
MBD3-201ENST00000156825 SCP2P22307 547 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 NPEPPSP55786 919 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 MTM1Q13496 603 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 CDR2LQ86X02 465 aaPredicted RBP20.04■□□□□ 0.8
MBD3-201ENST00000156825 DDX27Q96GQ7 796 aaKnown RBP20.04■□□□□ 0.8
MBD3-201ENST00000156825 OLA1Q9NTK5 396 aaKnown RBP20.04■□□□□ 0.8
MBD3-201ENST00000156825 MOSPD1Q9UJG1 213 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 DCTN4Q9UJW0 460 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 JCADQ9P266 1359 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 CDC42BPBQ9Y5S2 1711 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 KLK7P49862 253 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 ZNF280CQ8ND82 737 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 ATXN7L3BQ96GX2 97 aa20.04■□□□□ 0.8
MBD3-201ENST00000156825 TRPA1O75762 1119 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 PDIA2Q13087 525 aaKnown RBP20.03■□□□□ 0.8
MBD3-201ENST00000156825 ART3Q13508 389 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 GCNAQ96QF7 691 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 AGAP1Q9UPQ3 857 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 SLC9A1P19634 815 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 YWHAHQ04917 246 aaPredicted RBP20.03■□□□□ 0.8
MBD3-201ENST00000156825 POU5F1BQ06416 359 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 RFFLQ8WZ73 363 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 AGPAT1Q99943 283 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 SNX9Q9Y5X1 595 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 MYO3AQ8NEV4 1616 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 A0A1W2PQC6 194 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 SMIM24O75264 130 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 PMS2P54278 862 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 FRMD5Q7Z6J6 570 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 VCPKMTQ9H867 229 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 EVI5O60447 810 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 SLC13A1Q9BZW2 595 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 KCNF1Q9H3M0 494 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 NYAP2Q9P242 653 aa20.03■□□□□ 0.8
MBD3-201ENST00000156825 TPX2Q9ULW0 747 aaKnown RBP20.03■□□□□ 0.8
MBD3-201ENST00000156825 GLE1Q53GS7 698 aaKnown RBP20.02■□□□□ 0.8
MBD3-201ENST00000156825 RSBN1LQ6PCB5 846 aaPredicted RBP20.02■□□□□ 0.8
MBD3-201ENST00000156825 LRRC71Q8N4P6 559 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 CPSF2Q9P2I0 782 aaKnown RBP20.02■□□□□ 0.8
MBD3-201ENST00000156825 CNTNAP5Q8WYK1 1306 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 GCKP35557 465 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 HEATR6Q6AI08 1181 aaKnown RBP20.02■□□□□ 0.8
MBD3-201ENST00000156825 CCNYL1Q8N7R7 359 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 TUFT1Q9NNX1 390 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 TFR2Q9UP52 801 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 EPC2Q52LR7 807 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 E4F1Q66K89 784 aaPredicted RBP20.02■□□□□ 0.8
MBD3-201ENST00000156825 TTC13Q8NBP0 860 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 SPATA4Q8NEY3 305 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 RNPC3Q96LT9 517 aaKnown RBP20.02■□□□□ 0.8
MBD3-201ENST00000156825 FAM118BQ9BPY3 351 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 FAM8A1Q9UBU6 413 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 HPS5Q9UPZ3 1129 aa20.02■□□□□ 0.8
MBD3-201ENST00000156825 H0Y3Z8 333 aa20.02■□□□□ 0.79
MBD3-201ENST00000156825 KRT14P02533 472 aa20.02■□□□□ 0.79
MBD3-201ENST00000156825 GMPSP49915 693 aaPredicted RBP20.02■□□□□ 0.79
MBD3-201ENST00000156825 SPARCL1Q14515 664 aa20.02■□□□□ 0.79
MBD3-201ENST00000156825 TTC30AQ86WT1 665 aa20.02■□□□□ 0.79
MBD3-201ENST00000156825 RHOT1Q8IXI2 618 aa20.02■□□□□ 0.79
MBD3-201ENST00000156825 OR6J1Q8NGC5 347 aa20.02■□□□□ 0.79
MBD3-201ENST00000156825 PRDM5Q9NQX1 630 aaPredicted RBP20.02■□□□□ 0.79
MBD3-201ENST00000156825 STAP1Q9ULZ2 295 aa20.02■□□□□ 0.79
MBD3-201ENST00000156825 BEND6Q5SZJ8 279 aaPredicted RBP20.01■□□□□ 0.79
MBD3-201ENST00000156825 LRRC1Q9BTT6 524 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 IP6K2Q9UHH9 426 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 KIF3CO14782 793 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 KPNA2P52292 529 aaKnown RBP20.01■□□□□ 0.79
MBD3-201ENST00000156825 TAF1BQ53T94 588 aaPredicted RBP20.01■□□□□ 0.79
MBD3-201ENST00000156825 LRRC31Q6UY01 552 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 LCA5Q86VQ0 697 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 RNF217Q8TC41 542 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 SPATA17Q96L03 361 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 GOLPH3Q9H4A6 298 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 CCDC78A2IDD5 438 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 SPECC1L-ADORA2AF8WAN1 911 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 PDGFRBP09619 1106 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 C6orf222P0C671 652 aaPredicted RBP20.01■□□□□ 0.79
MBD3-201ENST00000156825 CPB1P15086 417 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 HNRNPH2P55795 449 aaKnown RBP20.01■□□□□ 0.79
MBD3-201ENST00000156825 EPM2AIP1Q7L775 607 aaPredicted RBP20.01■□□□□ 0.79
MBD3-201ENST00000156825 EDEM3Q9BZQ6 932 aa20.01■□□□□ 0.79
MBD3-201ENST00000156825 DIS3Q9Y2L1 958 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms