RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 C6orf118Q5T5N4 469 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 SEPT14Q6ZU15 432 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 UBL4BQ8N7F7 174 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 CBWD1Q9BRT8 395 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 COA1Q9GZY4 146 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 FGFR1OP2Q9NVK5 253 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 NYAP2Q9P242 653 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 SRCAPQ6ZRS2 3230 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 EP400Q96L91 3159 aa15.1■□□□□ 0.01
USH1C-201ENST00000005226 GOLGA8IPA6NC78 632 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 GOLGA8JA6NMD2 632 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 UBOX5O94941 541 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 DLATP10515 647 aaKnown RBP15.09■□□□□ 0.01
USH1C-201ENST00000005226 GHRP10912 638 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 CTNNA2P26232 953 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 COILP38432 576 aaPredicted RBP15.09■□□□□ 0.01
USH1C-201ENST00000005226 GPC5P78333 572 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 TNIP1Q15025 636 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 TRPM8Q7Z2W7 1104 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 NOP9Q86U38 636 aaKnown RBP15.09■□□□□ 0.01
USH1C-201ENST00000005226 KIF2BQ8N4N8 673 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 GDAP1Q8TB36 358 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 PLEKHO2Q8TD55 490 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 STAMBPL1Q96FJ0 436 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 FAM198AQ9UFP1 575 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 TCP11X1B4DZS4 312 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 ASAP2O43150 1006 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 CYP26A1O43174 497 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 HIP1RO75146 1068 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 FOSP01100 380 aaPredicted RBP15.09■□□□□ 0.01
USH1C-201ENST00000005226 GH2P01242 217 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 CHRNB2P17787 502 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 CHKAP35790 457 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 SLC47A2Q86VL8 602 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 DYDC1Q8WWB3 177 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 FAM84AQ96KN4 292 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 MTRF1LQ9UGC7 380 aaKnown RBP15.09■□□□□ 0.01
USH1C-201ENST00000005226 KIF13BQ9NQT8 1826 aa15.09■□□□□ 0.01
USH1C-201ENST00000005226 CLDN3O15551 220 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 SPOPO43791 374 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 GAS7O60861 476 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 PSMD10O75832 226 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 AGTP01019 485 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 VPS41P49754 854 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 DRG2P55039 364 aaKnown RBP15.08■□□□□ 0.01
USH1C-201ENST00000005226 COL23A1Q86Y22 540 aaPredicted RBP15.08■□□□□ 0.01
USH1C-201ENST00000005226 RHOT2Q8IXI1 618 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 DAW1Q8N136 415 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 ATG4AQ8WYN0 398 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 PRCCQ92733 491 aaPredicted RBP15.08■□□□□ 0.01
USH1C-201ENST00000005226 FAM212AQ96EL1 285 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 CRAMP1Q96RY5 1269 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 FAM118BQ9BPY3 351 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 UNC45AQ9H3U1 944 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 KCNK9Q9NPC2 374 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 PRR12Q9ULL5 1215 aa15.08■□□□□ 0.01
USH1C-201ENST00000005226 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
USH1C-201ENST00000005226 TMEM150BA6NC51 233 aa15.08■□□□□ 0
USH1C-201ENST00000005226 A8MUI8 341 aa15.08■□□□□ 0
USH1C-201ENST00000005226 GH1P01241 217 aa15.08■□□□□ 0
USH1C-201ENST00000005226 BMP3P12645 472 aa15.08■□□□□ 0
USH1C-201ENST00000005226 ECE1P42892 770 aa15.08■□□□□ 0
USH1C-201ENST00000005226 ADCY2Q08462 1091 aa15.08■□□□□ 0
USH1C-201ENST00000005226 ZKSCAN8Q15776 578 aaPredicted RBP15.08■□□□□ 0
USH1C-201ENST00000005226 SEL1L2Q5TEA6 688 aa15.08■□□□□ 0
USH1C-201ENST00000005226 DAB2IPQ5VWQ8 1189 aa15.08■□□□□ 0
USH1C-201ENST00000005226 SLC13A5Q86YT5 568 aaPredicted RBP15.08■□□□□ 0
USH1C-201ENST00000005226 MKNK1Q9BUB5 465 aa15.08■□□□□ 0
USH1C-201ENST00000005226 PCYOX1Q9UHG3 505 aa15.08■□□□□ 0
USH1C-201ENST00000005226 PNMA3Q9UL41 463 aa15.08■□□□□ 0
USH1C-201ENST00000005226 SUFUQ9UMX1 484 aa15.08■□□□□ 0
USH1C-201ENST00000005226 SLC12A4Q9UP95 1085 aa15.08■□□□□ 0
USH1C-201ENST00000005226 TRIM33Q9UPN9 1127 aa15.08■□□□□ 0
USH1C-201ENST00000005226 PFASO15067 1338 aa15.08■□□□□ 0
USH1C-201ENST00000005226 ATP8B3O60423 1300 aa15.08■□□□□ 0
USH1C-201ENST00000005226 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0
USH1C-201ENST00000005226 K7ENM7 598 aa15.08■□□□□ 0
USH1C-201ENST00000005226 EZRP15311 586 aaKnown RBP15.08■□□□□ 0
USH1C-201ENST00000005226 MPP2Q14168 576 aa15.08■□□□□ 0
USH1C-201ENST00000005226 ABCB5Q2M3G0 1257 aa15.08■□□□□ 0
USH1C-201ENST00000005226 EPC2Q52LR7 807 aa15.08■□□□□ 0
USH1C-201ENST00000005226 NUP85Q9BW27 656 aa15.08■□□□□ 0
USH1C-201ENST00000005226 CDC42EP4Q9H3Q1 356 aaKnown RBP15.08■□□□□ 0
USH1C-201ENST00000005226 TBK1Q9UHD2 729 aa15.08■□□□□ 0
USH1C-201ENST00000005226 ZBTB21Q9ULJ3 1066 aa15.08■□□□□ 0
USH1C-201ENST00000005226 BCRP11274 1271 aa15.07■□□□□ 0
USH1C-201ENST00000005226 SIX1Q15475 284 aaPredicted RBP15.07■□□□□ 0
USH1C-201ENST00000005226 PPP2R5EQ16537 467 aa15.07■□□□□ 0
USH1C-201ENST00000005226 C2CD6Q53TS8 623 aa15.07■□□□□ 0
USH1C-201ENST00000005226 SPDYCQ5MJ68 293 aa15.07■□□□□ 0
USH1C-201ENST00000005226 C1orf220Q5T0J3 134 aa15.07■□□□□ 0
USH1C-201ENST00000005226 ARHGEF2Q92974 986 aaKnown RBP15.07■□□□□ 0
USH1C-201ENST00000005226 ART4Q93070 314 aa15.07■□□□□ 0
USH1C-201ENST00000005226 THOC1Q96FV9 657 aaKnown RBP15.07■□□□□ 0
USH1C-201ENST00000005226 TRIM7Q9C029 511 aa15.07■□□□□ 0
USH1C-201ENST00000005226 AAASQ9NRG9 546 aa15.07■□□□□ 0
USH1C-201ENST00000005226 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.07■□□□□ 0
USH1C-201ENST00000005226 FOCADQ5VW36 1801 aa15.07■□□□□ 0
USH1C-201ENST00000005226 TMEM120BA0PK00 339 aa15.07■□□□□ 0
USH1C-201ENST00000005226 PODXLO00592 558 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms