RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Kif13aQ9EQW7 1749 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 JrklB2RRL2 523 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Gm4307E9PZY4 289 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Gm4312K9J7E2 289 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 AgtP11859 477 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Hspa1lP16627 641 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Nlrp4aQ8BU40 982 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Tldc1Q8K0P3 455 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Alg1Q921Q3 482 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Scrn1Q9CZC8 414 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Akt3Q9WUA6 479 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Pcdh11xF6ZNL5 1338 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 AdgbG3UZ78 1657 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Gm28961A0A087WPA5 222 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Gm21858A0A087WQ24 222 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Nr1i3O35627 358 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Krt80Q0VBK2 452 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 CrkQ64010 304 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Trub2Q91WG3 331 aaKnown RBP9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Rnf112Q96DY5 654 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Josd2Q9CR30 188 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Stau1Q9Z108 487 aaKnown RBP9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Rasgrp1Q9Z1S3 795 aa9.79□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Pfdn6Q03958 127 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Tmprss11aQ3UQ41 389 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 MtrrQ8C1A3 696 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Olfr805Q8VFI4 319 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Eif3hQ91WK2 352 aaKnown RBP9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Nek8Q91ZR4 698 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Coro7Q9D2V7 922 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 ErmapQ9JLN5 566 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Soat2O88908 525 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Psmc1P62192 440 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Srrm1Q52KI8 946 aaKnown RBP9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Dync1li2Q6PDL0 492 aaKnown RBP9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Phactr3Q8BYK5 558 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Bbs7Q8K2G4 715 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Krt17Q9QWL7 433 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Gm43738A0A0G2JEA5 862 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Il17raQ60943 864 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 AmphQ7TQF7 686 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 CcnyQ8BGU5 341 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Heatr3Q8BQM4 679 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Aldh5a1Q8BWF0 523 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Nkiras1Q8CEC5 192 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Lgi2Q8K4Z0 550 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Dact1Q8R4A3 778 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Hdac11Q91WA3 347 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 NelfcdQ922L6 591 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Gm29133A0A1B0GT72 266 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Eno3P21550 434 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Wee1P47810 646 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Nsun7Q14AW5 724 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Cyp2c67Q569X9 491 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Myo19Q5SV80 963 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Dnajc3Q91YW3 504 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Polr3eQ9CZT4 710 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Crlf3Q9Z2L7 442 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Nwd1A6H603 1563 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Fam43bA2AM80 330 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Trmt1lA2RSY6 728 aaKnown RBP9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 YwhahP68510 246 aaKnown RBP9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Lmntd2Q0VET5 664 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Zbed4Q80WQ9 1168 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Rapgef5Q8C0Q9 814 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 CbsQ91WT9 561 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Kiaa0232Q80U59 1396 aaKnown RBP9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Prss51A0A286YDY8 319 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Angpt1O08538 498 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Mpp3O88910 568 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Map2k2Q63932 401 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Klhl14Q69ZK5 630 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Fam118bQ8C569 351 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Acat1Q8QZT1 424 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Ttc4Q8R3H9 386 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Trim7Q923T7 510 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Med15Q924H2 789 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Slc2a5Q9WV38 501 aa9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Zc3h13E9Q784 1729 aaKnown RBP9.78□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Gm5483B2RV77 97 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Gm17615E9Q9P2 165 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Ankrd42Q3V096 527 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Zbtb8osQ505B7 168 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Lilrb4Q64281 335 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 TbataQ7TSD4 393 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Scfd1Q8BRF7 639 aaKnown RBP9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Strip1Q8C079 837 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Calhm6Q8C9E8 313 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Btbd7Q8CFE5 1130 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Mettl13Q91YR5 698 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Polr3cQ9D483 533 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 AvenQ9D9K3 342 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Abhd2Q9QXM0 425 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Atp6v0a1Q9Z1G4 839 aaKnown RBP9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 Sucla2Q9Z2I9 463 aa9.77□□□□□ -0.84
Scn8a-213ENSMUST00000201549 1700017N19RikA0A087WPJ1 469 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Plekhg4A0A1L1SU27 1217 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 SelenovD3YXG1 328 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pacsin1Q61644 441 aa9.77□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Psmd5Q8BJY1 504 aa9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms