RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 LdhbP16125 334 aaKnown RBP12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Col9a2Q07643 688 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Cracr2aQ3UP38 310 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Gm10488Q4KL05 212 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 SpdyaQ5IBH7 310 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ints8Q80V86 995 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Mageb18Q8BQR7 327 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Usp20Q8C6M1 916 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Fam20aQ8CID3 541 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Rnf225Q9D7D1 332 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Syngap1F6SEU4 1340 aa12.35□□□□□ -0.43
Vps54-202ENSMUST00000109578 Oip5A2AQ14 241 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 UgcgO88693 394 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Frmd8Q3UFK8 466 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Msantd2Q6NZR2 559 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Xpnpep1Q6P1B1 623 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 GmipQ6PGG2 971 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Cpa5Q8R4H4 436 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Mrpl11Q9CQF0 192 aaKnown RBP12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Sppl3Q9CUS9 384 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Lactbl1S4R213 581 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 NynrinQ5DTZ0 1840 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Lrrc74aA0A1Y7VMD6 494 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Apba1B2RUJ5 842 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Shox2P70390 331 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Wdr41Q3UDP0 460 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Sun2Q8BJS4 731 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Efl1Q8C0D5 1127 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Pkn3Q8K045 878 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Spdl1Q923A2 608 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ggt5Q9Z2A9 573 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ctnna2Q61301 953 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ppp1r13bQ62415 1087 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Daam2Q80U19 1115 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ccdc50Q810U5 305 aaKnown RBP12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Fkbp6Q91XW8 327 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Tom1l1Q923U0 474 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Cd2bp2Q9CWK3 342 aaKnown RBP12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Rfwd2Q9R1A8 733 aaKnown RBP12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Irx1P81068 480 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Rufy4Q3TYX8 563 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ece2Q80Z60 881 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Kiaa0391Q8JZY4 584 aaKnown RBP12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Mipol1Q9D9F8 279 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Nudt12Q9DCN1 462 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 MesdQ9ERE7 224 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Nfs1Q9Z1J3 459 aa12.34□□□□□ -0.43
Vps54-202ENSMUST00000109578 Gm45837F7D3W5 961 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Slc3a2P10852 526 aaKnown RBP12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Xrcc5P27641 732 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 4930502E18RikQ14BQ3 236 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Pde2aQ922S4 916 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Serpina9Q9D7D2 418 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Ccdc91Q9D8L5 442 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Txnrd2Q9JLT4 524 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Msh2P43247 935 aaKnown RBP12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 AdssP46664 456 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Mtus1Q5HZI1 1210 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 P4ha1Q60715 534 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Vav2Q60992 868 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Six1Q62231 284 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Tmem39bQ810L4 492 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Vgll2Q8BGW8 322 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Gprasp2Q8BUY8 826 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Gtf2ird1Q9JI57 1104 aaKnown RBP12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Serpinb6cW4VSP4 379 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Dhx15O35286 795 aaKnown RBP12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Dusp4Q8BFV3 398 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Sap130Q8BIH0 1057 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Iffo1Q8BXL9 562 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Proser2Q8C5R2 471 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 C130026I21RikQ8C898 291 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Slc12a8Q8VI23 705 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Klrc2Q9WTJ9 238 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 Mia3Q8BI84 1930 aa12.33□□□□□ -0.44
Vps54-202ENSMUST00000109578 DgkhD3YXJ0 1156 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Myo1eE9Q634 1107 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Barx2O08686 283 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Trmt1Q3TX08 663 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Palb2Q3U0P1 1104 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Retreg2Q6NS82 541 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Adat2Q6P6J0 191 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Trim37Q6PCX9 961 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Atg4cQ811C2 458 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Champ1Q8K327 802 aaKnown RBP12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 SncbQ91ZZ3 133 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Thumpd2Q9CZB3 528 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Rbm31yQ9D3U4 565 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Snx1Q9WV80 522 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 RptorQ8K4Q0 1335 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Ttll6A4Q9E8 822 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Krt19P19001 403 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 rp9P97762 213 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Agbl1Q09M05 972 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Eepd1Q3TGW2 569 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Tfcp2l1Q3UNW5 479 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 L3mbtl3Q8BLB7 883 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Tmx4Q8C0L0 335 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Fbxo43Q8CDI2 640 aa12.32□□□□□ -0.44
Vps54-202ENSMUST00000109578 Btbd6Q8K2J9 488 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms