RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 TbckQ8BM85 762 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 BlmhQ8R016 455 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gpsm2Q8VDU0 679 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Thap12Q9CUX1 758 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Chordc1Q9D1P4 331 aaKnown RBP10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ecel1Q9JMI0 775 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rnf4Q9QZS2 194 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Sec14l1A8Y5H7 715 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gm5926E9PWJ8 236 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gm7995L7N2E4 160 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Syt2P46097 422 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ankmy2Q3TPE9 440 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 TraddQ3U0V2 310 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ppp1r12cQ3UMT1 782 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Dph1Q5NCQ5 438 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Oca2Q62052 833 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Fsd1lQ8BYN5 507 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nemp2Q8CB65 421 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nxnl2Q9D531 156 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Serpina9Q9D7D2 418 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 IscuQ9D7P6 168 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rfwd2Q9R1A8 733 aaKnown RBP10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Noc2lQ9WV70 747 aaKnown RBP10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ccdc88aQ5SNZ0 1873 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gm28360A0A087WR25 190 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Cetn1P41209 172 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Akr1b8P45377 316 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Lrch1P62046 709 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Zscan2Q07230 614 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Atp13a3Q5XF89 1219 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rusc1Q8BG26 893 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rcn2Q8BP92 320 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Kiaa0391Q8JZY4 584 aaKnown RBP10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Znrd1-asQ8R0E5 213 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 RpainQ9CWY9 219 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 TarsQ9D0R2 722 aaKnown RBP10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 SmapQ9R0P4 181 aaKnown RBP10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Mast2Q60592 1734 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Duox1A2AQ92 1551 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gm5737A0A140LI11 423 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Apol7bB1AQP7 369 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 4930544D05RikJ3QK56 214 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 P01734 135 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Dynlt1P51807 113 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Pkn1P70268 946 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tmem120bQ3TA38 339 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Apol7eQ3UZ24 369 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Psen2Q61144 448 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Stxbp2Q64324 593 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Scaf8Q6DID3 1268 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Xlr3bQ6P205 226 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 1700016D06RikQ9DAA5 166 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Pcsk1nQ9QXV0 258 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gyg1Q9R062 333 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Sgk1Q9WVC6 431 aa10.4□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ifnb1P01575 182 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 VdrP48281 422 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 FaxcQ3UMF9 409 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ndufaf2Q59J78 168 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Zcchc2Q69ZB8 1166 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tmem117Q8BH18 514 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gnl3Q8CI11 538 aaKnown RBP10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cyp2d26Q8CIM7 500 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ciapin1Q8WTY4 309 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Atp5c1Q91VR2 298 aaKnown RBP10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Senp2Q91ZX6 588 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Zbed3Q9D0L1 228 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Col22a1E9Q7P1 1613 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Znf804aA2AKY4 1200 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Bfsp1A2AMT1 669 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Zfp266E9Q2S7 604 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 AaasP58742 546 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 SbdsP70122 250 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ppp1r13lQ5I1X5 824 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tdpoz4Q6YCH2 370 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Q8BGD0 127 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Phf20Q8BLG0 1010 aaKnown RBP10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Scfd2Q8BTY8 684 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rapgef5Q8C0Q9 814 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 WdpcpQ8C456 722 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tbc1d10cQ8C9V1 444 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Q8VDP2 222 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Fkbp6Q91XW8 327 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rabgef1Q9JM13 491 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pdcd7Q9WTY1 482 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Sucla2Q9Z2I9 463 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 PappaQ8R4K8 1624 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 C87977A2A958 498 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Oip5A2AQ14 241 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pde4aO89084 844 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Nedd1P33215 660 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pon1P52430 355 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Sema3eP70275 775 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Neurog2P70447 263 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cnga4Q3UW12 575 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cyp2c67Q569X9 491 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 PrimpolQ6P1E7 537 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Crybg3Q80W49 1005 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Atg4cQ811C2 458 aa10.39□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gprc5cQ8K3J9 440 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms