RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 CbarpQ66L44 698 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Erlin2Q8BFZ9 340 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Klhl11Q8CE33 709 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ces1fQ91WU0 561 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gys1Q9Z1E4 738 aaKnown RBP17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Znf804aA2AKY4 1200 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Cfap221A9Q751 836 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Vmn2r63E9Q0K5 859 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gm9268E9Q0M3 861 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Vmn2r62K7N712 859 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ccnd2P30280 289 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Baiap3Q80TT2 1134 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Slc17a8Q8BFU8 601 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gramd4Q8CB44 633 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Med15Q924H2 789 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 IdeQ9JHR7 1019 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Nudt5Q9JKX6 218 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gm382B1AXN3 1250 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 P01734 135 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Bace1P56818 501 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Q8BGD0 127 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Snx14Q8BHY8 964 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Dennd1aQ8K382 1016 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Dnajc28Q8VCE1 385 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gm1661E9Q963 441 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Nptx2O70340 429 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 MycnP03966 462 aaKnown RBP17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 4930502E18RikQ14BQ3 236 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Bri3bpQ8BXV2 253 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ttc8Q8VD72 515 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 HlcsQ920N2 722 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Fam133bQ9CVI2 245 aaKnown RBP17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Tcirg1Q9JHF5 834 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Prmt2Q9R144 448 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Grk1Q9WVL4 564 aa17.21■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Trim55G3X8Y1 545 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 TazI7HJS2 263 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Zfp457L7N1X4 647 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 ThbdP15306 577 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ercc5P35689 1170 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Cap1P40124 474 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Psmc5P62196 406 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Wdr41Q3UDP0 460 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gpd2Q64521 727 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Srrm3Q80WV7 648 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Leg1Q8C6C9 337 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Znf445Q8R2V3 986 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Slc12a8Q8VI23 705 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Snapc2Q91XA5 359 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Lztr1Q9CQ33 837 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Olr1Q9EQ09 363 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Krt17Q9QWL7 433 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gm10436L7N1Y3 520 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Erbb2P70424 1256 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 EsrrbQ61539 433 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Cyp3a11Q64459 504 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gnl3Q8CI11 538 aaKnown RBP17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Spire2Q8K1S6 718 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Trappc12Q8K2L8 797 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ranbp17Q99NF8 1088 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Arhgef25Q9CWR0 618 aa17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Xab2Q9DCD2 855 aaKnown RBP17.2■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Lrrc74aA0A1Y7VMD6 494 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tax1bp1Q3UKC1 814 aaKnown RBP17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Siglec10Q80ZE3 688 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Btbd6Q8K2J9 488 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Klhl36Q8R124 613 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Cnot8Q9D8X5 292 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Cpb2Q9JHH6 422 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Capn15Q9JLG8 1095 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Mms22lB1AUR6 1238 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ephb4P54761 987 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gtf2bP62915 316 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ppp2r2aQ6P1F6 447 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ttyh3Q6P5F7 524 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tbc1d22bQ80VE5 505 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Lrrc45Q8CIM1 670 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Tom1l1Q923U0 474 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Pdxdc1Q99K01 787 aaKnown RBP17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Spc24Q9D083 201 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Sv2aQ9JIS5 742 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Frmpd3A0A140LIW3 1774 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rasal2E9PW37 1286 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rrp36Q3UFY0 244 aaKnown RBP17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Oca2Q62052 833 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Sema5aQ62217 1077 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gpr156Q6PCP7 798 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Mageb18Q8BQR7 327 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 C130026I21RikQ8C898 291 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Fbxo43Q8CDI2 640 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Znrd1-asQ8R0E5 213 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ccdc124Q9D8X2 217 aaKnown RBP17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ggt5Q9Z2A9 573 aa17.19■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Gm21973F6WEZ7 68 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Rnf216P58283 853 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 GabpaQ00422 454 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Ctc1Q5SUQ9 1212 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Pla2g4cQ64GA5 597 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 LdhdQ7TNG8 484 aa17.18■□□□□ 0.34
Ckap4-201ENSMUST00000053871 Q9D2Q3 444 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms