RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 TufmQ8BFR5 452 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Lrrc8dQ8BGR2 859 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Ddx28Q9CWT6 540 aaKnown RBP11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Atp9aO70228 1047 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 TxkP42682 527 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 WhrnQ80VW5 918 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 LRWD1Q8BUI3 648 aaKnown RBP11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Caap1Q8VDY9 356 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Kif19Q99PT9 997 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 PodxlQ9R0M4 503 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Rfx8D3YU81 596 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Lrrc32G3XA59 663 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Cdh2P15116 906 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Ifnar1P33896 590 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Ddx19bQ8BZY3 494 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Q91WD4 421 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Caln1Q9JJG7 219 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Vmn2r79E9Q067 851 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Eno3P21550 434 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Large2Q5XPT3 690 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Tspan9Q8BJU2 239 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Efl1Q8C0D5 1127 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 ClmnQ8C5W0 1052 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Tasp1Q8R1G1 420 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Serbp1Q9CY58 407 aaKnown RBP11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Terb2Q9D494 218 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Gm5795E9PZN8 263 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Vmn2r71L7N2D8 855 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Dlgap3Q6PFD5 977 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Nlrp4bQ8C6J9 863 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 SnrkQ8VDU5 748 aa11.32□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Patl2A2ARM1 529 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 RalgdsQ03385 852 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Lmntd2Q0VET5 664 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Q3KNL4 93 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Llgl2Q3TJ91 1027 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Pitpnm3Q3UHE1 974 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Caprin1Q60865 707 aaKnown RBP11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Gstt1Q64471 240 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Nme8Q715T0 586 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Dpp8Q80YA7 892 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Ccdc77Q9CZH8 489 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Prpsap1Q9D0M1 356 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Txnrd1Q9JMH6 613 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 TnrQ8BYI9 1358 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Cdr2lA2A6T1 465 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Gm10639E9Q6L7 222 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Trappc3O55013 180 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Gsta2P10648 222 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Vps4bP46467 444 aaKnown RBP11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Pcif1P59114 706 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Snx19Q6P4T1 997 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Dcaf5Q80T85 946 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 CnstQ8CBC4 711 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Kcnv2Q8CFS6 562 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Nr2e3Q9QXZ7 395 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 GakQ99KY4 1305 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Gpr182P43142 395 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Tmc5Q32NZ6 967 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Rnf112Q96DY5 654 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Asna1O54984 348 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 LdhbP16125 334 aaKnown RBP11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Sept1P42209 366 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 MyrfQ3UR85 1138 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Fam228bQ497Q6 232 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Nmd3Q99L48 503 aaKnown RBP11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Rbm6S4R1W5 1118 aaKnown RBP11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Vmn2r78K7N6U5 853 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Stam2O88811 523 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 DnttP09838 530 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 AgtP11859 477 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Ckap2Q3V1H1 664 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Dna2Q6ZQJ5 1062 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Rbbp8Q80YR6 893 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Sgsm3Q8VCZ6 750 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 NonoQ99K48 473 aaKnown RBP11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Lrrc17Q9CXD9 443 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Mzf1S4R1L6 814 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Cacna1cQ01815 2139 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Trim72Q1XH17 477 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Ttll4Q80UG8 1193 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Emilin1Q99K41 1017 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Dnajc7Q9QYI3 494 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Zbtb18Q9WUK6 522 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Large1Q9Z1M7 756 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 A0A1Y7VML8 143 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Rnaseh1O70338 285 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Tarsl2Q8BLY2 790 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Uba6Q8C7R4 1053 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Tp53bp2Q8CG79 1128 aa11.31□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Slc35g2D3YVE8 412 aa11.3□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Tcp10bE9PYJ0 438 aa11.3□□□□□ -0.6
Nipbl-201ENSMUST00000052965 PdgfaP20033 211 aa11.3□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Q5EBG8 199 aa11.3□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Bcap31Q61335 245 aa11.3□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Krt73Q6NXH9 539 aa11.3□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Ubxn10Q8BG34 277 aa11.3□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Mcrs1Q99L90 462 aa11.3□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Fthl17aQ9DAX0 182 aa11.3□□□□□ -0.6
Nipbl-201ENSMUST00000052965 Znf608Q56A10 1511 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms