RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Nhsl1Q8CAF4 1587 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Apol7bB1AQP7 369 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Slc16a2O70324 545 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 EporP14753 507 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Epb41l4aP52963 686 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ptprn2P80560 1001 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Klrb1Q0ZUP1 214 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ankmy2Q3TPE9 440 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Apol7eQ3UZ24 369 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ccdc84Q4VA36 332 aaKnown RBP11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Vav2Q60992 868 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ptger2Q62053 362 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Fsd1lQ8BYN5 507 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 ClasrpQ8CFC7 668 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Depdc1aQ8CIG0 804 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Spns2Q91VM4 549 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Tdrd3Q91W18 743 aaKnown RBP11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Pde6cQ91ZQ1 861 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 AticQ9CWJ9 592 aaKnown RBP11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Pabpc6Q9D4E6 643 aaKnown RBP11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Q9DAQ4 598 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 IvdQ9JHI5 424 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Nfs1Q9Z1J3 459 aa11.05□□□□□ -0.64
Clip3-201ENSMUST00000014065 Apol8A2VDH7 339 aaKnown RBP11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Heatr4E9Q357 955 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Gm3182K7N6T8 263 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Serpinb8O08800 374 aaKnown RBP11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 FosP01101 380 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Atf2P16951 487 aaKnown RBP11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 ArP19091 899 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Vcam1P29533 739 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Nedd1P33215 660 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Shox2P70390 331 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 GclcP97494 637 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ect2Q07139 913 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Syne3Q4FZC9 975 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Kiaa0319Q5SZV5 1081 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Dnajc8Q6NZB0 253 aaKnown RBP11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ttyh3Q6P5F7 524 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Bst2Q8R2Q8 172 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 CpzQ8R4V4 654 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Tdrd12Q9CWU0 1215 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Orc3Q9JK30 715 aaKnown RBP11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Klrc2Q9WTJ9 238 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Kat6bQ8BRB7 1872 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Astn1Q61137 1302 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Aff1O88573 1216 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Cyp11b2P15539 500 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Casp4P70343 373 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Cyp11b1Q3TG86 501 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 MyrflQ3UN70 904 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Fam81aQ3UXZ6 364 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ccdc125Q5U465 500 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 OgdhQ60597 1023 aaKnown RBP11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 CrkQ64010 304 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Sugp2Q8CH09 1067 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 F11Q91Y47 624 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Chchd3Q9CRB9 227 aaKnown RBP11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Bcs1lQ9CZP5 418 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 TarsQ9D0R2 722 aaKnown RBP11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 PycardQ9EPB4 193 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Nphs1Q9QZS7 1256 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Mzf1S4R1L6 814 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Kndc1Q0KK55 1742 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Lonrf2B2RT44 518 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Zfp839E9PUU5 921 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 GzmgP13366 248 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Cd68P31996 326 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 LxnP70202 222 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Aars2Q14CH7 980 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Pid1Q3UBG2 217 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Tm4sf1Q64302 202 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Zcchc2Q69ZB8 1166 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Zswim5Q80TC6 1188 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Znf428Q8C1M2 176 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Pih1h3bQ8C6P5 218 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Zbtb44Q8R0A2 453 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Sec14l2Q99J08 403 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Cd2bp2Q9CWK3 342 aaKnown RBP11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Phf2Q9WTU0 1096 aa11.04□□□□□ -0.64
Clip3-201ENSMUST00000014065 Olfr310B2RVZ1 332 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Mmp15O54732 657 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Ctnnal1O88327 731 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Il13ra2O88786 383 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Aimp1P31230 310 aaKnown RBP11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Cops2P61202 443 aaKnown RBP11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 RilpQ5ND29 369 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Klra6Q60653 266 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 P4ha1Q60715 534 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Fbxo10Q7TQF2 950 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Scfd1Q8BRF7 639 aaKnown RBP11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Tbc1d10cQ8C9V1 444 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 MyripQ8K3I4 856 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Sumf1Q8R0F3 372 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Rpa1Q8VEE4 623 aaKnown RBP11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Rbm31yQ9D3U4 565 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Gm15262A0A140LIQ5 728 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Flvcr1B2RXV4 560 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Fam47eD3YWC7 402 aa11.03□□□□□ -0.64
Clip3-201ENSMUST00000014065 Speer2E9Q9U2 264 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms