RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 KynuQ9CXF0 464 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pramef12Q9D2F1 463 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Eya4Q9Z191 616 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Uhrf1bp1lA2RSJ4 1457 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zyg11aA2BFL2 627 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ifit3bE9PV48 403 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm3371F7CQW8 167 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 PdgfraP26618 1089 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 SftpbP50405 377 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Vwa3aQ3UVV9 1148 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tnfaip2Q61333 691 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Q6GQU0 248 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tdpoz2Q717B2 364 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cdc42bpgQ80UW5 1551 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rbm12b1Q80YR9 836 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc7a14Q8BXR1 771 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cnot3Q8K0V4 751 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 BrdtQ91Y44 956 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ndel1Q9ERR1 345 aa9.68□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm6370A0A0G2JGX9 315 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Klhl41A2AUC9 606 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm17019K7N6W5 255 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm6309L7N481 315 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ppp3ccP48455 513 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Exosc10P56960 887 aaKnown RBP9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Dynll1P63168 89 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kcnk9Q3LS21 402 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Trim75Q3UWZ0 467 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Adam1aQ60813 791 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ttc26Q8BS45 554 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gprasp2Q8BUY8 826 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Epc1Q8C9X6 813 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zbtb1Q91VL9 713 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Taf11Q99JX1 211 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pabpc6Q9D4E6 643 aaKnown RBP9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ccdc103Q9D9P2 237 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kif21bQ9QXL1 1668 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Med14A2ABV5 1459 aaKnown RBP9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm1141B9EJU1 475 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Trim12cD3Z3L3 497 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Cacna2d1O08532 1103 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tpp1O89023 562 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ap2a2P17427 938 aaKnown RBP9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 RalaP63321 206 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Inf2Q0GNC1 1273 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ppp4r3cQ3V0Y1 813 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pacsin1Q61644 441 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Hsph1Q61699 858 aaKnown RBP9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Mcf2lQ64096 1149 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Prrg3Q6PAQ9 231 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rasgrp4Q8BTM9 673 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tlk1Q8C0V0 766 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ccdc90bQ8C3X2 256 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Strip2Q8C9H6 844 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Vmn1r191Q8K4D0 298 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Stx11Q9D3G5 287 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ubxn8Q9QZ49 277 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Rps6ka4Q9Z2B9 773 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Herc3A6H6S0 1050 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zfp558E9Q1J0 407 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Zfp788E9Q980 884 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Phldb3E9QAF4 648 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Nfkbil1O88995 381 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 ChrngP04760 519 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 LtkP08923 888 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 CybbQ61093 570 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Krt31Q61765 416 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Sarm1Q6PDS3 724 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Enoph1Q8BGB7 257 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tph2Q8CGV2 488 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kbtbd4Q8R179 534 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Iqcf1Q9D9K8 182 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pard6bQ9JK83 371 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pdp2Q504M2 532 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Sh3gl1Q62419 368 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gucy2gQ6TL19 1100 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 FtoQ8BGW1 502 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pcdhb7Q8CDY9 829 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Stap2Q8R0L1 411 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Nup85Q8R480 656 aaKnown RBP9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Thg1lQ9CY52 298 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tubgcp4Q9D4F8 667 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Kbtbd12Q9D618 625 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Chmp2aQ9DB34 222 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 NvlQ9DBY8 855 aaKnown RBP9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Tmem47Q9JJG6 181 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Adam22Q9R1V6 904 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Slc2a5Q9WV38 501 aa9.67□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 SphkapQ6NSW3 1687 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 BicraF8VPZ9 1578 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Gm21083A0A0G2JFD5 256 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Hsf3D0VYS2 492 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Pid1Q3UBG2 217 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Akap14Q3V0I7 536 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Mapre1Q61166 268 aaKnown RBP9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Deup1Q7M6Y5 601 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 SgczQ8BX51 311 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Dnajc5gQ8C632 165 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Ahi1Q8K3E5 1047 aa9.66□□□□□ -0.86
Ccdc47-201ENSMUST00000002043 Vmn1r214Q8R279 367 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms