RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W DET1Q99288 334 aaKnown RBP2.06□□□□□ -2.08
NUP100YKL068W SUC2P00724 532 aa2.06□□□□□ -2.08
NUP100YKL068W ATP6P00854 259 aa2.06□□□□□ -2.08
NUP100YKL068W RPP0P05317 312 aaKnown RBP2.06□□□□□ -2.08
NUP100YKL068W RPS3P05750 240 aaKnown RBP2.06□□□□□ -2.08
NUP100YKL068W PUT1P09368 476 aa2.06□□□□□ -2.08
NUP100YKL068W SEN2P16658 377 aa2.06□□□□□ -2.08
NUP100YKL068W NDC1P32500 655 aa2.06□□□□□ -2.08
NUP100YKL068W TOA2P32774 122 aa2.06□□□□□ -2.08
NUP100YKL068W YBR241CP38142 488 aa2.06□□□□□ -2.08
NUP100YKL068W IKI1P38874 309 aa2.06□□□□□ -2.08
NUP100YKL068W FRT2P39734 528 aa2.06□□□□□ -2.08
NUP100YKL068W COX15P40086 486 aa2.06□□□□□ -2.08
NUP100YKL068W SOK1P40317 901 aa2.06□□□□□ -2.08
NUP100YKL068W YCH1P42937 148 aa2.06□□□□□ -2.08
NUP100YKL068W YFR057WP43625 151 aa2.06□□□□□ -2.08
NUP100YKL068W LSM1P47017 172 aaKnown RBP2.06□□□□□ -2.08
NUP100YKL068W RTT101P47050 842 aa2.06□□□□□ -2.08
NUP100YKL068W YJR149WP47177 404 aa2.06□□□□□ -2.08
NUP100YKL068W ECL1P48235 211 aa2.06□□□□□ -2.08
NUP100YKL068W ALG13P53178 202 aa2.06□□□□□ -2.08
NUP100YKL068W LST7P53237 242 aa2.06□□□□□ -2.08
NUP100YKL068W ASI1P54074 624 aa2.06□□□□□ -2.08
NUP100YKL068W RNT1Q02555 471 aa2.06□□□□□ -2.08
NUP100YKL068W CTF19Q02732 369 aa2.06□□□□□ -2.08
NUP100YKL068W YEH2Q07950 538 aa2.06□□□□□ -2.08
NUP100YKL068W ILV1P00927 576 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W RPS24AP0CX31 135 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W RPS24BP0CX32 135 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W ASP3-2P0CX77 362 aa2.05□□□□□ -2.08
NUP100YKL068W ASP3-3P0CX78 362 aa2.05□□□□□ -2.08
NUP100YKL068W ASP3-4P0CX79 362 aa2.05□□□□□ -2.08
NUP100YKL068W ASP3-1P0CZ17 362 aa2.05□□□□□ -2.08
NUP100YKL068W NAM2P11325 894 aa2.05□□□□□ -2.08
NUP100YKL068W SPO12P17123 173 aa2.05□□□□□ -2.08
NUP100YKL068W MRPL8P22353 238 aa2.05□□□□□ -2.08
NUP100YKL068W POF1P25576 258 aa2.05□□□□□ -2.08
NUP100YKL068W MKK1P32490 508 aa2.05□□□□□ -2.08
NUP100YKL068W FES1P38260 290 aa2.05□□□□□ -2.08
NUP100YKL068W PRS2P38620 318 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W RCK2P38623 610 aa2.05□□□□□ -2.08
NUP100YKL068W GIM4P40005 111 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W DDI1P40087 428 aa2.05□□□□□ -2.08
NUP100YKL068W TIS11P47977 285 aa2.05□□□□□ -2.08
NUP100YKL068W YGL235WP53071 178 aa2.05□□□□□ -2.08
NUP100YKL068W MTM1P53320 366 aa2.05□□□□□ -2.08
NUP100YKL068W YNL095CP53932 642 aa2.05□□□□□ -2.08
NUP100YKL068W STP1Q00947 519 aa2.05□□□□□ -2.08
NUP100YKL068W YDC1Q02896 317 aa2.05□□□□□ -2.08
NUP100YKL068W CSM3Q04659 317 aa2.05□□□□□ -2.08
NUP100YKL068W YPR147CQ06522 304 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W GAT3Q07928 141 aa2.05□□□□□ -2.08
NUP100YKL068W SKI7Q08491 747 aaPredicted RBP2.05□□□□□ -2.08
NUP100YKL068W ORT1Q12375 292 aa2.05□□□□□ -2.08
NUP100YKL068W PET20Q99373 253 aa2.05□□□□□ -2.08
NUP100YKL068W HIS4P00815 799 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W RPL28P02406 149 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W AMD1P15274 810 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W EHD3P28817 500 aa2.05□□□□□ -2.08
NUP100YKL068W TPS2P31688 896 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W NUP2P32499 720 aa2.05□□□□□ -2.08
NUP100YKL068W SSO1P32867 290 aa2.05□□□□□ -2.08
NUP100YKL068W YCR041WP37265 110 aa2.05□□□□□ -2.08
NUP100YKL068W FZO1P38297 855 aa2.05□□□□□ -2.08
NUP100YKL068W MIT1P40002 666 aa2.05□□□□□ -2.08
NUP100YKL068W FAU1P40099 211 aa2.05□□□□□ -2.08
NUP100YKL068W JLP2P40206 208 aa2.05□□□□□ -2.08
NUP100YKL068W PRM10P42946 383 aa2.05□□□□□ -2.08
NUP100YKL068W IRC7P43623 340 aa2.05□□□□□ -2.08
NUP100YKL068W CAF40P53829 373 aa2.05□□□□□ -2.08
NUP100YKL068W SPR6Q01684 191 aa2.05□□□□□ -2.08
NUP100YKL068W IRC4Q03036 179 aa2.05□□□□□ -2.08
NUP100YKL068W ARC18Q05933 178 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W TMA10Q06177 86 aa2.05□□□□□ -2.08
NUP100YKL068W YDL218WQ07629 317 aa2.05□□□□□ -2.08
NUP100YKL068W WTM1Q12363 437 aaKnown RBP2.05□□□□□ -2.08
NUP100YKL068W RPL20AP0CX23 172 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W RPL20BP0CX24 172 aaPredicted RBP2.04□□□□□ -2.08
NUP100YKL068W RNA15P25299 296 aaPredicted RBP2.04□□□□□ -2.08
NUP100YKL068W CHA1P25379 360 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W YCR102CP25608 368 aa2.04□□□□□ -2.08
NUP100YKL068W BUB3P26449 341 aa2.04□□□□□ -2.08
NUP100YKL068W NAM9P27929 486 aa2.04□□□□□ -2.08
NUP100YKL068W CDC13P32797 924 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W SRP102P36057 244 aaPredicted RBP2.04□□□□□ -2.08
NUP100YKL068W HMT1P38074 348 aa2.04□□□□□ -2.08
NUP100YKL068W MRX3P38172 270 aa2.04□□□□□ -2.08
NUP100YKL068W LAG1P38703 411 aa2.04□□□□□ -2.08
NUP100YKL068W RBG1P39729 369 aa2.04□□□□□ -2.08
NUP100YKL068W HAT2P39984 401 aa2.04□□□□□ -2.08
NUP100YKL068W YAT2P40017 923 aa2.04□□□□□ -2.08
NUP100YKL068W SMB1P40018 196 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W SIM1P40472 476 aa2.04□□□□□ -2.08
NUP100YKL068W BMT5P40493 336 aa2.04□□□□□ -2.08
NUP100YKL068W RPL10P41805 221 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W IMD3P50095 523 aaKnown RBP2.04□□□□□ -2.08
NUP100YKL068W CDH1P53197 566 aa2.04□□□□□ -2.08
NUP100YKL068W GND2P53319 492 aa2.04□□□□□ -2.08
NUP100YKL068W FRE4P53746 719 aa2.04□□□□□ -2.08
NUP100YKL068W SNO1Q03144 224 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms