RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PLEKHG4Q58EX7 1191 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 ANO5Q75V66 913 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 OTUD6AQ7L8S5 288 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 ASCL5Q7RTU5 278 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 GPBP1Q86WP2 473 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 ELOA2Q8IYF1 753 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-228ENST00000641847 SYT2Q8N9I0 419 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-228ENST00000641847 ATP8B4Q8TF62 1192 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 APBB2Q92870 758 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 ERCC4Q92889 916 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-228ENST00000641847 NKD2Q969F2 451 aaPredicted RBP10.41□□□□□ -0.74
PHGDH-228ENST00000641847 C16orf70Q9BSU1 422 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 RUSC1Q9BVN2 902 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 BLZF1Q9H2G9 400 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 ANKEF1Q9NU02 776 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 ERAP1Q9NZ08 941 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 EPG5Q9HCE0 2579 aa10.41□□□□□ -0.74
PHGDH-228ENST00000641847 CACNA1BQ00975 2339 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 USO1O60763 962 aaKnown RBP10.4□□□□□ -0.74
PHGDH-228ENST00000641847 TBX10O75333 385 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 F2P00734 622 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 KRT18P05783 430 aaKnown RBP10.4□□□□□ -0.74
PHGDH-228ENST00000641847 MYL1P05976 194 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 XRCC6P12956 609 aaKnown RBP eCLIP10.4□□□□□ -0.74
PHGDH-228ENST00000641847 CYP11B2P19099 503 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 NBL1P41271 181 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 NPEPPSP55786 919 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 AMPD3Q01432 767 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 DPYDQ12882 1025 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 ADAM15Q13444 863 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 CUL4BQ13620 913 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 MBTPS1Q14703 1052 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 CBX2Q14781 532 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-228ENST00000641847 ZSCAN23Q3MJ62 389 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 MTERF2Q49AM1 385 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 XKR9Q5GH70 373 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-228ENST00000641847 KAT2BQ92831 832 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 RPGRIP1Q96KN7 1286 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 CEP170P1Q96L14 293 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 SH2D3AQ9BRG2 576 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 PHF7Q9BWX1 381 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-228ENST00000641847 PLVAPQ9BX97 442 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 TRIM9Q9C026 710 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 LRRC27Q9C0I9 530 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 GZF1Q9H116 711 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-228ENST00000641847 CYP26B1Q9NR63 512 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 NRBP2Q9NSY0 501 aa10.4□□□□□ -0.74
PHGDH-228ENST00000641847 BMP2KQ9NSY1 1161 aaPredicted RBP10.4□□□□□ -0.74
PHGDH-228ENST00000641847 TRIP12Q14669 1992 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-228ENST00000641847 NPHP3-ACAD11A0A0J9YXS1 232 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 SYCE3A1L190 88 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 FSD2A1L4K1 749 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 H3BRB1 525 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 GRM6O15303 877 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 CAND2O75155 1236 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 LETM1O95202 739 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-228ENST00000641847 SMC2O95347 1197 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 ASIC1P78348 528 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 CACNB1Q02641 598 aaPredicted RBP10.39□□□□□ -0.75
PHGDH-228ENST00000641847 RAD51AP2Q09MP3 1159 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 COASYQ13057 564 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 PTPN21Q16825 1174 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
PHGDH-228ENST00000641847 ARSHQ5FYA8 562 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 RINT1Q6NUQ1 792 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 PADI6Q6TGC4 694 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 RBM43Q6ZSC3 357 aaKnown RBP10.39□□□□□ -0.75
PHGDH-228ENST00000641847 DYMQ7RTS9 669 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 SMRP1Q8NCR6 262 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 SMARCE1Q969G3 411 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 ASIC4Q96FT7 647 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 MSLNLQ96KJ4 702 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 C7orf25Q9BPX7 421 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 NIFKQ9BYG3 293 aaKnown RBP10.39□□□□□ -0.75
PHGDH-228ENST00000641847 RNPEPQ9H4A4 650 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 TUT1Q9H6E5 874 aaKnown RBP10.39□□□□□ -0.75
PHGDH-228ENST00000641847 KCND2Q9NZV8 630 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 GVINP1Q7Z2Y8 2422 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 COL1A2P08123 1366 aa10.39□□□□□ -0.75
PHGDH-228ENST00000641847 MYO7AQ13402 2215 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 ZNF292O60281 2723 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 DNAH14Q0VDD8 3507 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 HBP1O60381 514 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 TBCAO75347 108 aaKnown RBP10.38□□□□□ -0.75
PHGDH-228ENST00000641847 DGAT1O75907 488 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 CSPG5O95196 566 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 RPN1P04843 607 aaKnown RBP10.38□□□□□ -0.75
PHGDH-228ENST00000641847 SRGAP2BP0DMP2 458 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 POLGP54098 1239 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-228ENST00000641847 PPFIA1Q13136 1202 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 EMC2Q15006 297 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 TARBP2Q15633 366 aaKnown RBP10.38□□□□□ -0.75
PHGDH-228ENST00000641847 CNNM4Q6P4Q7 775 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 TRAF7Q6Q0C0 670 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 C1orf186Q6ZWK4 172 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 SERINC5Q86VE9 423 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 ADSSL1Q8N142 457 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
PHGDH-228ENST00000641847 DDX12PQ92771 950 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms