RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	CCDC149	Q6ZUS6	474 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	GPR149	Q86SP6	731 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	RHPN2	Q8IUC4	686 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	ADSSL1	Q8N142	457 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	RSAD2	Q8WXG1	361 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	WASF1	Q92558	559 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	SLC5A5	Q92911	643 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	NKD2	Q969F2	451 aa	Predicted RBP	11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	NLRP4	Q96MN2	994 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	TEKT3	Q9BXF9	490 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	SFXN1	Q9H9B4	322 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	STK36	Q9NRP7	1315 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	UST	Q9Y2C2	406 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	IRAK3	Q9Y616	596 aa		11.22	□□□□□ -0.61
PHGDH-222	ENST00000641587	GVINP1	Q7Z2Y8	2422 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	IGKV6-21	A0A0C4DH24	114 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587		H3BQV1	296 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	C2CD2L	O14523	706 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	PRPF3	O43395	683 aa	Known RBP	11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	PSMD10	O75832	226 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	TDP2	O95551	362 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	CNP	P09543	421 aa	Known RBP	11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	AOC1	P19801	751 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	PDC	P20941	246 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	SFPQ	P23246	707 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	GNA11	P29992	359 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	CLCN4	P51793	760 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	POLG	P54098	1239 aa	Predicted RBP	11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	RNASEL	Q05823	741 aa	Known RBP	11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	BMS1	Q14692	1282 aa	Known RBP	11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	NTRK3	Q16288	839 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	GLB1L	Q6UWU2	654 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	AGMO	Q6ZNB7	445 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	MIER3	Q7Z3K6	550 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	CCDC105	Q8IYK2	499 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	SIX5	Q8N196	739 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	PLCD3	Q8N3E9	789 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	KLHL5	Q96PQ7	755 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	RNF26	Q9BY78	433 aa	Predicted RBP	11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	KCNK12	Q9HB15	430 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	DUSP12	Q9UNI6	340 aa		11.21	□□□□□ -0.61
PHGDH-222	ENST00000641587	DOCK8	Q8NF50	2099 aa		11.21	□□□□□ -0.62
PHGDH-222	ENST00000641587	VPS37C	A5D8V6	355 aa	Predicted RBP	11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	DEXI	O95424	95 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	POMC	P01189	267 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	KLRC2	P26717	231 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	SFN	P31947	248 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	JAK3	P52333	1124 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	TDG	Q13569	410 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	TRIM29	Q14134	588 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	GIT2	Q14161	759 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	ANGPT1	Q15389	498 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	LARP1B	Q659C4	914 aa	Known RBP	11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	B3GNT9	Q6UX72	402 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	CATSPER4	Q7RTX7	472 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	ZNF710	Q8N1W2	664 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	ZNF579	Q8NAF0	562 aa	Known RBP	11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	TBCK	Q8TEA7	893 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	ACSF2	Q96CM8	615 aa	Predicted RBP	11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	C8orf76	Q96K31	380 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	RIT2	Q99578	217 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	TRAIP	Q9BWF2	469 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	NIFK	Q9BYG3	293 aa	Known RBP	11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	CHST12	Q9NRB3	414 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	FBXL21	Q9UKT6	434 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	PCDHB2	Q9Y5E7	798 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	FRYL	O94915	3013 aa		11.2	□□□□□ -0.62
PHGDH-222	ENST00000641587	KRBA1	A5PL33	1030 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	DDX11L8	A8MPP1	907 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587		F8W810	466 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	LILRB3	O75022	631 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	CFH	P08603	1231 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	FDPS	P14324	419 aa	Known RBP	11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	XBP1	P17861	261 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	ID4	P47928	161 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	NPEPPS	P55786	919 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	GUCY1B3	Q02153	619 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	LETM2	Q2VYF4	491 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	XKR3	Q5GH77	459 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	ANO5	Q75V66	913 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	OTOP3	Q7RTS5	596 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	TAS1R1	Q7RTX1	841 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	ZNF410	Q86VK4	478 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	DTWD2	Q8NBA8	298 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	AIFM3	Q96NN9	605 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	MINDY3	Q9H8M7	445 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	IFT122	Q9HBG6	1241 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	MAN1C1	Q9NR34	630 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	AGPAT5	Q9NUQ2	364 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	MARCH5	Q9NX47	278 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	CHMP5	Q9NZZ3	219 aa		11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.19	□□□□□ -0.62
PHGDH-222	ENST00000641587	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms