RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TELO2Q9Y4R8 837 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 PMM2O15305 246 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 PHACTR2O75167 634 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 DAAM2Q86T65 1068 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 NT5DC3Q86UY8 548 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 MAP4K3Q8IVH8 894 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 SLC35G2Q8TBE7 412 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 ACTRT1Q8TDG2 376 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 RFFLQ8WZ73 363 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 ATP6V0A1Q93050 837 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 VTI1AQ96AJ9 217 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 CEP170P1Q96L14 293 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 AGPAT1Q99943 283 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 TEX13BQ9BXU2 312 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 TMEM117Q9H0C3 514 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 OSGEPQ9NPF4 335 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 A1CFQ9NQ94 594 aaKnown RBP18.5■□□□□ 0.55
PHGDH-211ENST00000641213 KMT5AQ9NQR1 393 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 GDF3Q9NR23 364 aa18.5■□□□□ 0.55
PHGDH-211ENST00000641213 DENND3A2RUS2 1198 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 NFASCO94856 1347 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 HEXIM1O94992 359 aaKnown RBP18.49■□□□□ 0.55
PHGDH-211ENST00000641213 CNGA1P29973 690 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 SOX10P56693 466 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 SNRNP35Q16560 246 aaKnown RBP18.49■□□□□ 0.55
PHGDH-211ENST00000641213 SWSAP1Q6NVH7 229 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 PALB2Q86YC2 1186 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 CBWD2Q8IUF1 395 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 IFT20Q8IY31 132 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 METTL13Q8N6R0 699 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 CTNNBL1Q8WYA6 563 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-211ENST00000641213 KIFAP3Q92845 792 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 NTPCRQ9BSD7 190 aaKnown RBP18.49■□□□□ 0.55
PHGDH-211ENST00000641213 ACAD9Q9H845 621 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 PSD3Q9NYI0 1048 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 TAS2R14Q9NYV8 317 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 GGA3Q9NZ52 723 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 TMOD4Q9NZQ9 345 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 USP20Q9Y2K6 914 aa18.49■□□□□ 0.55
PHGDH-211ENST00000641213 PFASO15067 1338 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 IGSF9BQ9UPX0 1349 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 ERICH4A6NGS2 130 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 AGPSO00116 658 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 CEP104O60308 925 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 PSAPP07602 524 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 ABCB4P21439 1286 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 GGCXP38435 758 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 MXI1P50539 228 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 EMBQ6PCB8 327 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 SLC20A1Q8WUM9 679 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 SPIRE2Q8WWL2 714 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 SAAL1Q96ER3 474 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 SGIP1Q9BQI5 828 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 JPH1Q9HDC5 661 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-211ENST00000641213 SEPT11Q9NVA2 429 aaKnown RBP18.48■□□□□ 0.55
PHGDH-211ENST00000641213 DKC1O60832 514 aaKnown RBP eCLIP18.48■□□□□ 0.551e-16■■■■■ 39.7
PHGDH-211ENST00000641213 TNNC1P63316 161 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 PPATQ06203 517 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 SCFD2Q8WU76 684 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 HES6Q96HZ4 224 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 C17orf75Q9HAS0 396 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 EPB41L5Q9HCM4 733 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 PDLIM7Q9NR12 457 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 GPRC5DQ9NZD1 345 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 SLC9A2Q9UBY0 812 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 AFG3L2Q9Y4W6 797 aa18.48■□□□□ 0.55
PHGDH-211ENST00000641213 ANKRD62A6NC57 917 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 ZSCAN5CA6NGD5 496 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-211ENST00000641213 SPDYE16A6NNV3 312 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-211ENST00000641213 BUB1BO60566 1050 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-211ENST00000641213 RNF40O75150 1001 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 GUCY2DQ02846 1103 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 NOL9Q5SY16 702 aaKnown RBP18.47■□□□□ 0.55
PHGDH-211ENST00000641213 SLC39A4Q6P5W5 647 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 CCDC60Q8IWA6 550 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-211ENST00000641213 CAVIN3Q969G5 261 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 ARHGEF26Q96DR7 871 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 CDHR1Q96JP9 859 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 THAP2Q9H0W7 228 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 PLEKHA4Q9H4M7 779 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 HOXC10Q9NYD6 342 aa18.47■□□□□ 0.55
PHGDH-211ENST00000641213 SPATA31C2B4DYI2 1134 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 PGRMC1O00264 195 aaKnown RBP18.46■□□□□ 0.55
PHGDH-211ENST00000641213 STAM2O75886 525 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 CARSP49589 748 aaKnown RBP18.46■□□□□ 0.55
PHGDH-211ENST00000641213 ACTR2P61160 394 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 SP4Q02446 784 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 MAP2K1Q02750 393 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-211ENST00000641213 ABHD15Q6UXT9 468 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 RASGEF1CQ8N431 466 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 PARD3BQ8TEW8 1205 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 RIN2Q8WYP3 895 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-211ENST00000641213 KAT5Q92993 513 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.46■□□□□ 0.556e-10■■■■□ 22.4
PHGDH-211ENST00000641213 AMFRQ9UKV5 643 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 ADGRA3Q8IWK6 1321 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 GOLGA6BA6NDN3 693 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 RAD51CO43502 376 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 DGAT1O75907 488 aa18.46■□□□□ 0.55
PHGDH-211ENST00000641213 HIRAP54198 1017 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms