RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 GARSP41250 739 aaKnown RBP18.79■□□□□ 0.6
SCARB2-223ENST00000640640 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.79■□□□□ 0.6
SCARB2-223ENST00000640640 SYT2Q8N9I0 419 aaPredicted RBP18.79■□□□□ 0.6
SCARB2-223ENST00000640640 RNF149Q8NC42 400 aa18.79■□□□□ 0.6
SCARB2-223ENST00000640640 HSPH1Q92598 858 aa18.79■□□□□ 0.6
SCARB2-223ENST00000640640 DEFB129Q9H1M3 183 aa18.79■□□□□ 0.6
SCARB2-223ENST00000640640 SLITRK6Q9H5Y7 841 aa18.79■□□□□ 0.6
SCARB2-223ENST00000640640 IL17RBQ9NRM6 502 aa18.79■□□□□ 0.6
SCARB2-223ENST00000640640 MORC2Q9Y6X9 1032 aaPredicted RBP18.79■□□□□ 0.6
SCARB2-223ENST00000640640 A0A1W2PQJ5 194 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 ANXA13P27216 316 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 NCAPHQ15003 741 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 ANGEL2Q5VTE6 544 aaKnown RBP18.78■□□□□ 0.6
SCARB2-223ENST00000640640 PRAMEF18Q5VWM3 479 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 RIOX1Q9H6W3 641 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 AMACRQ9UHK6 382 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 TARSL2A2RTX5 802 aaKnown RBP18.78■□□□□ 0.6
SCARB2-223ENST00000640640 RGL2O15211 777 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 MT-ND3P03897 115 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 DPEP1P16444 411 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 CA4P22748 312 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 EFNA5P52803 228 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 MORC4Q8TE76 937 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 RNPC3Q96LT9 517 aaKnown RBP18.78■□□□□ 0.6
SCARB2-223ENST00000640640 PLAGL2Q9UPG8 496 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 ECE1P42892 770 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 EARS2Q5JPH6 523 aaKnown RBP18.78■□□□□ 0.6
SCARB2-223ENST00000640640 TRIM72Q6ZMU5 477 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 LMNTD2Q8IXW0 634 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 AGBL3Q8NEM8 1001 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 MMP19Q99542 508 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 MKNK1Q9BUB5 465 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 PPP1R12CQ9BZL4 782 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 WNT8AQ9H1J5 351 aa18.78■□□□□ 0.6
SCARB2-223ENST00000640640 POLR3CQ9BUI4 534 aaPredicted RBP18.78■□□□□ 0.6
SCARB2-223ENST00000640640 GGPS1O95749 300 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 TFDP2Q14188 446 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 SNRNP35Q16560 246 aaKnown RBP18.77■□□□□ 0.6
SCARB2-223ENST00000640640 RPS6P62753 249 aaKnown RBP18.77■□□□□ 0.6
SCARB2-223ENST00000640640 PRPSAP1Q14558 356 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 PLA2G4FQ68DD2 849 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 TMEM143Q96AN5 459 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 SCYL1Q96KG9 808 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 RAB3IPQ96QF0 476 aaPredicted RBP18.77■□□□□ 0.6
SCARB2-223ENST00000640640 DDTLA6NHG4 134 aaPredicted RBP18.77■□□□□ 0.6
SCARB2-223ENST00000640640 RNASELQ05823 741 aaKnown RBP18.77■□□□□ 0.6
SCARB2-223ENST00000640640 TRIM59Q8IWR1 403 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 REXO1L1PQ8IX06 675 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 C2orf69Q8N8R5 385 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 TTC13Q8NBP0 860 aa18.77■□□□□ 0.6
SCARB2-223ENST00000640640 EIF3DO15371 548 aaKnown RBP eCLIP18.77■□□□□ 0.59
SCARB2-223ENST00000640640 ACOT2P49753 483 aa18.77■□□□□ 0.59
SCARB2-223ENST00000640640 TTI2Q6NXR4 508 aa18.77■□□□□ 0.59
SCARB2-223ENST00000640640 RHOT1Q8IXI2 618 aa18.77■□□□□ 0.59
SCARB2-223ENST00000640640 TACO1Q9BSH4 297 aaKnown RBP18.77■□□□□ 0.59
SCARB2-223ENST00000640640 EHD4Q9H223 541 aa18.77■□□□□ 0.59
SCARB2-223ENST00000640640 COPB2P35606 906 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 CCDC137Q6PK04 289 aaKnown RBP18.76■□□□□ 0.59
SCARB2-223ENST00000640640 DSTYKQ6XUX3 929 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 ZNF526Q8TF50 670 aaPredicted RBP18.76■□□□□ 0.59
SCARB2-223ENST00000640640 SAYSD1Q9NPB0 183 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 WTIPA6NIX2 430 aaPredicted RBP18.76■□□□□ 0.59
SCARB2-223ENST00000640640 RTN2O75298 545 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 SCP2P22307 547 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 GMPSP49915 693 aaPredicted RBP18.76■□□□□ 0.59
SCARB2-223ENST00000640640 NPEPPSP55786 919 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 NAB2Q15742 525 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 SAMD7Q7Z3H4 446 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 ATG4CQ96DT6 458 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 GGA3Q9NZ52 723 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 KIAA0391O15091 583 aaKnown RBP18.76■□□□□ 0.59
SCARB2-223ENST00000640640 TXNP10599 105 aaKnown RBP18.76■□□□□ 0.59
SCARB2-223ENST00000640640 PSMC1P62191 440 aaKnown RBP18.76■□□□□ 0.59
SCARB2-223ENST00000640640 MOXD1Q6UVY6 613 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 SPATA24Q86W54 205 aa18.76■□□□□ 0.59
SCARB2-223ENST00000640640 FAM187AA6NFU0 413 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 MAFGO15525 162 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 MS4A14Q96JA4 679 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 EFCC1Q9HA90 598 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 PCSK1NQ9UHG2 260 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 AFG3L2Q9Y4W6 797 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 ARHGEF37A1IGU5 675 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 MED24O75448 989 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 OATP04181 439 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 CIITAP33076 1130 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 FASTKD5Q7L8L6 764 aaKnown RBP18.75■□□□□ 0.59
SCARB2-223ENST00000640640 SEPT1Q8WYJ6 367 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 ASNSD1Q9NWL6 643 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 ARHGAP42A6NI28 874 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 CAP2P40123 477 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 AP3M2P53677 418 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 HNRNPH2P55795 449 aaKnown RBP18.75■□□□□ 0.59
SCARB2-223ENST00000640640 TWF2Q6IBS0 349 aaKnown RBP18.75■□□□□ 0.59
SCARB2-223ENST00000640640 KCNV1Q6PIU1 500 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 ELP3Q9H9T3 547 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 GINM1Q9NU53 330 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 TTC7AQ9ULT0 858 aaPredicted RBP18.75■□□□□ 0.59
SCARB2-223ENST00000640640 MYBL1P10243 752 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 PSMD6Q15008 389 aa18.75■□□□□ 0.59
SCARB2-223ENST00000640640 SLC35G2Q8TBE7 412 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms