RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	PRKCB	P05771	671 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	ADSS	P30520	456 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	ATN1	P54259	1190 aa	Predicted RBP	19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	AMHR2	Q16671	573 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	CDKAL1	Q5VV42	579 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	FOXR2	Q6PJQ5	311 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	RPAIN	Q86UA6	219 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	ZC3H3	Q8IXZ2	948 aa	Known RBP	19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	NME8	Q8N427	588 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	TSG101	Q99816	390 aa		19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	INO80B	Q9C086	356 aa	Predicted RBP	19.47	■□□□□ 0.71
SPIN3-238	ENST00000640421	GOLGA6L19	H0YKK7	550 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	HNRNPDL	O14979	420 aa	Known RBP	19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	CTSH	P09668	335 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	FGFR4	P22455	802 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	STRN3	Q13033	797 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	PTK7	Q13308	1070 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	MAPK6	Q16659	721 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	EDRF1	Q3B7T1	1238 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	FAM126B	Q8IXS8	530 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	CBWD1	Q9BRT8	395 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	TARS2	Q9BW92	718 aa	Known RBP	19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	NOD1	Q9Y239	953 aa		19.46	■□□□□ 0.71
SPIN3-238	ENST00000640421	PIGR	P01833	764 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	NR3C1	P04150	777 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	SCP2	P22307	547 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	MRPS6	P82932	125 aa	Known RBP	19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	TPD52L1	Q16890	204 aa	Predicted RBP	19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	SLC39A5	Q6ZMH5	540 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	PPP4R3CP	Q6ZMV5	832 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	HS2ST1	Q7LGA3	356 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	ZSWIM2	Q8NEG5	633 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	OSBPL7	Q9BZF2	842 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	HAPLN2	Q9GZV7	340 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	CALU	O43852	315 aa	Predicted RBP	19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	CHRNA1	P02708	482 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	DARS	P14868	501 aa	Known RBP	19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	NR2F2	P24468	414 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	ABCD1	P33897	745 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	THPO	P40225	353 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	MGAT3	Q09327	533 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	SNX17	Q15036	470 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	ANKLE1	Q8NAG6	615 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	BICD1	Q96G01	975 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	PAWR	Q96IZ0	340 aa	Known RBP	19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	ZBTB45	Q96K62	511 aa	Predicted RBP	19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	TMEM106C	Q9BVX2	250 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	CELF4	Q9BZC1	486 aa	Known RBP	19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	EXOC7	Q9UPT5	735 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	CDY2A	Q9Y6F7	541 aa		19.45	■□□□□ 0.7
SPIN3-238	ENST00000640421	ACKR2	O00590	384 aa		19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	CD4	P01730	458 aa		19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	CASP4	P49662	377 aa		19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	CDC42EP1	Q00587	391 aa		19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	FKBP3	Q00688	224 aa	Known RBP	19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	ADAM9	Q13443	819 aa		19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	NFIL3	Q16649	462 aa		19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	SRGAP1	Q7Z6B7	1085 aa		19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	GCOM2	Q9BZD3	368 aa	Predicted RBP	19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	PCIF1	Q9H4Z3	704 aa		19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	DMAC2	Q9NW81	257 aa		19.44	■□□□□ 0.7
SPIN3-238	ENST00000640421	EIF4B	P23588	611 aa	Known RBP	19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	CYP2J2	P51589	502 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	CRYBB1	P53674	252 aa	Predicted RBP	19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	FAM187B	Q17R55	369 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	ACO2	Q99798	780 aa	Known RBP	19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	MRPL4	Q9BYD3	311 aa	Known RBP	19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	THAP9	Q9H5L6	903 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	PRMT7	Q9NVM4	692 aa	Predicted RBP	19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	ABLIM1	O14639	778 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	TSPAN1	O60635	241 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	PQBP1	O60828	265 aa	Known RBP	19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	AKAP3	O75969	853 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	LIG4	P49917	911 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	PRPF4B	Q13523	1007 aa	Known RBP	19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	RSPH3	Q86UC2	560 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	CDR2L	Q86X02	465 aa	Predicted RBP	19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	C12orf56	Q8IXR9	622 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	GOLGA5	Q8TBA6	731 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	SEZ6L	Q9BYH1	1024 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	TRPV2	Q9Y5S1	764 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	STYXL1	Q9Y6J8	313 aa		19.43	■□□□□ 0.7
SPIN3-238	ENST00000640421	UVSSA	Q2YD98	709 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	ZNF618	Q5T7W0	954 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	ARMCX5	Q6P1M9	558 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	TRAF7	Q6Q0C0	670 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	ZPBP2	Q6X784	338 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	APTX	Q7Z2E3	356 aa	Known RBP	19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	TMEM174	Q8WUU8	243 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	CPB2	Q96IY4	423 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	HSPBP1	Q9NZL4	362 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	ANKFY1	Q9P2R3	1169 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	CNTNAP2	Q9UHC6	1331 aa		19.42	■□□□□ 0.7
SPIN3-238	ENST00000640421	CKB	P12277	381 aa		19.41	■□□□□ 0.7
SPIN3-238	ENST00000640421	ARF4	P18085	180 aa	Predicted RBP	19.41	■□□□□ 0.7
SPIN3-238	ENST00000640421	MRE11	P49959	708 aa		19.41	■□□□□ 0.7
SPIN3-238	ENST00000640421	TRIM60	Q495X7	471 aa		19.41	■□□□□ 0.7
SPIN3-238	ENST00000640421	EEF1DP3	Q658K8	133 aa		19.41	■□□□□ 0.7
SPIN3-238	ENST00000640421	TSHZ1	Q6ZSZ6	1077 aa		19.41	■□□□□ 0.7
SPIN3-238	ENST00000640421	ANKRD33	Q7Z3H0	272 aa		19.41	■□□□□ 0.7

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms