RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 HSP90AA1P07900 732 aaKnown RBP12.97□□□□□ -0.33
MECP2-226ENST00000640414 CALM1P0DP23 149 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 CALM2P0DP24 149 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 CALM3P0DP25 149 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 MYBP10242 640 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 LAMP2P13473 410 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 ATP4AP20648 1035 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 EIF4BP23588 611 aaKnown RBP12.97□□□□□ -0.33
MECP2-226ENST00000640414 CLCN3P51790 818 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 ACAP1Q15027 740 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 RTN1Q16799 776 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 FAM160B1Q5W0V3 765 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 ABHD15Q6UXT9 468 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 NETO1Q8TDF5 533 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
MECP2-226ENST00000640414 SHDQ96IW2 340 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 ZNF668Q96K58 619 aaPredicted RBP12.97□□□□□ -0.33
MECP2-226ENST00000640414 MAP3K14Q99558 947 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 RPP25Q9BUL9 199 aaKnown RBP12.97□□□□□ -0.33
MECP2-226ENST00000640414 DDX23Q9BUQ8 820 aaKnown RBP12.97□□□□□ -0.33
MECP2-226ENST00000640414 SPZ1Q9BXG8 430 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 AGO4Q9HCK5 861 aaKnown RBP12.97□□□□□ -0.33
MECP2-226ENST00000640414 ZNF302Q9NR11 478 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 DNAJB4Q9UDY4 337 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 MTF2Q9Y483 593 aaPredicted RBP12.97□□□□□ -0.33
MECP2-226ENST00000640414 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.97□□□□□ -0.33
MECP2-226ENST00000640414 NUMBLQ9Y6R0 609 aa12.97□□□□□ -0.33
MECP2-226ENST00000640414 CARNS1A5YM72 827 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 DDX39AO00148 427 aaKnown RBP12.96□□□□□ -0.33
MECP2-226ENST00000640414 TBC1D4O60343 1298 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 B4GALT3O60512 393 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 JAK2O60674 1132 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 FGFR4P22455 802 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 SLC11A1P49279 550 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 GPC5P78333 572 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 DMWDQ09019 674 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 SPEM2Q0P670 501 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 SNW1Q13573 536 aaKnown RBP12.96□□□□□ -0.33
MECP2-226ENST00000640414 NTRK3Q16288 839 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 PDXDC2PQ6P474 469 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 TSSK4Q6SA08 328 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 CYP26C1Q6V0L0 522 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 CMTR1Q8N1G2 835 aaKnown RBP12.96□□□□□ -0.33
MECP2-226ENST00000640414 NSUN7Q8NE18 718 aaKnown RBP12.96□□□□□ -0.33
MECP2-226ENST00000640414 SMG7Q92540 1137 aaKnown RBP12.96□□□□□ -0.33
MECP2-226ENST00000640414 LPPQ93052 612 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 ZNF707Q96C28 371 aaPredicted RBP12.96□□□□□ -0.33
MECP2-226ENST00000640414 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.33
MECP2-226ENST00000640414 SEC63Q9UGP8 760 aaKnown RBP12.96□□□□□ -0.33
MECP2-226ENST00000640414 GMEB2Q9UKD1 530 aa12.96□□□□□ -0.33
MECP2-226ENST00000640414 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.33
MECP2-226ENST00000640414 CCDC196A0A1B0GTZ2 297 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.95□□□□□ -0.34
MECP2-226ENST00000640414 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 CPLX1O14810 134 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 PLEKHA8P1O95397 391 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 FUT2Q10981 343 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 UBXN2BQ14CS0 331 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 LONRF3Q496Y0 759 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 SWSAP1Q6NVH7 229 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 GET4Q7L5D6 327 aaPredicted RBP12.95□□□□□ -0.34
MECP2-226ENST00000640414 TRMT1LQ7Z2T5 733 aaKnown RBP12.95□□□□□ -0.34
MECP2-226ENST00000640414 SRBD1Q8N5C6 995 aaKnown RBP12.95□□□□□ -0.34
MECP2-226ENST00000640414 LINC01465Q8N7H1 131 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 CTCFLQ8NI51 663 aaPredicted RBP12.95□□□□□ -0.34
MECP2-226ENST00000640414 GBP3Q9H0R5 595 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 MRPL17Q9NRX2 175 aaKnown RBP12.95□□□□□ -0.34
MECP2-226ENST00000640414 DACT1Q9NYF0 836 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.95□□□□□ -0.34
MECP2-226ENST00000640414 ANGPTL2Q9UKU9 493 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 SMC3Q9UQE7 1217 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 AKT3Q9Y243 479 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 FAM208BQ5VWN6 2430 aa12.95□□□□□ -0.34
MECP2-226ENST00000640414 NID2Q14112 1375 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 MYH15Q9Y2K3 1946 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 C2CD2LO14523 706 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 FDPSP14324 419 aaKnown RBP12.94□□□□□ -0.34
MECP2-226ENST00000640414 DARSP14868 501 aaKnown RBP12.94□□□□□ -0.34
MECP2-226ENST00000640414 IFNAR1P17181 557 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 KIF5BP33176 963 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 PHKA2P46019 1235 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 CEP55Q53EZ4 464 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 NOMO2Q5JPE7 1267 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 GLB1LQ6UWU2 654 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 TMTC3Q6ZXV5 915 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 ZNF280BQ86YH2 543 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 CKAP2LQ8IYA6 745 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 LRRC71Q8N4P6 559 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 RSPH1Q8WYR4 309 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 FGF14Q92915 247 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 OSBPL6Q9BZF3 934 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 RBM28Q9NW13 759 aaKnown RBP12.94□□□□□ -0.34
MECP2-226ENST00000640414 INPP5FQ9Y2H2 1132 aa12.94□□□□□ -0.34
MECP2-226ENST00000640414 FAM170BA6NMN3 283 aa12.93□□□□□ -0.34
MECP2-226ENST00000640414 TEX28O15482 410 aa12.93□□□□□ -0.34
MECP2-226ENST00000640414 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
MECP2-226ENST00000640414 OFD1O75665 1012 aa12.93□□□□□ -0.34
MECP2-226ENST00000640414 PAPLNO95428 1278 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms