RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 C1orf115Q9H7X2 142 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 ELOVL5Q9NYP7 299 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 MYMKA6NI61 221 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 PRSS44E7EML9 344 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 HOXA3O43365 443 aaPredicted RBP1.87□□□□□ -2.11
LMBR1-222ENST00000638959 KRT15P19012 456 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 SLC10A2Q12908 348 aaPredicted RBP1.87□□□□□ -2.11
LMBR1-222ENST00000638959 GRM1Q13255 1194 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 LAMB3Q13751 1172 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 GPR19Q15760 415 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 KCNT2Q6UVM3 1135 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 GPRIN1Q7Z2K8 1008 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 OR5AN1Q8NGI8 311 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 NKD2Q969F2 451 aaPredicted RBP1.87□□□□□ -2.11
LMBR1-222ENST00000638959 MARK4Q96L34 752 aa1.87□□□□□ -2.11
LMBR1-222ENST00000638959 C14orf93Q9H972 538 aaKnown RBP1.87□□□□□ -2.11
LMBR1-222ENST00000638959 FAM221BA6H8Z2 402 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 KCNK3O14649 394 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 DAPK3O43293 454 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 EPHB2P29323 1055 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 KIR2DL3P43628 341 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 PLCD1P51178 756 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 SCAPQ12770 1279 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 COL9A2Q14055 689 aaPredicted RBP1.86□□□□□ -2.11
LMBR1-222ENST00000638959 DGKDQ16760 1214 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 FCRLBQ6BAA4 426 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 ARMC6Q6NXE6 501 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 GPR149Q86SP6 731 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 SYT12Q8IV01 421 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 ASB15Q8WXK1 588 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 WDR92Q96MX6 357 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 GBP4Q96PP9 640 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 ALG1Q9BT22 464 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 LSM14BQ9BX40 385 aaKnown RBP1.86□□□□□ -2.11
LMBR1-222ENST00000638959 SMURF1Q9HCE7 757 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 CASS4Q9NQ75 786 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 GINM1Q9NU53 330 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 ICKQ9UPZ9 632 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 FPGT-TNNI3KV9GXZ4 949 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 NOTCH3Q9UM47 2321 aa1.86□□□□□ -2.11
LMBR1-222ENST00000638959 MARCH11A6NNE9 402 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 PRR5-ARHGAP8B1AHC4 643 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 CFBP00751 764 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 CKBP12277 381 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 GRIA2P42262 883 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 NR4A2P43354 598 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 CASP7P55210 303 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 ANTXR2P58335 489 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 LINC00205P59089 165 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 GPR85P60893 370 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 TAGLNQ01995 201 aaKnown RBP1.85□□□□□ -2.11
LMBR1-222ENST00000638959 FBXO33Q7Z6M2 555 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 IFNL3Q8IZI9 196 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 PUM2Q8TB72 1066 aaKnown RBP eCLIP1.85□□□□□ -2.11
LMBR1-222ENST00000638959 DCAF4Q8WV16 495 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 ZFYVE21Q9BQ24 234 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 AARSD1Q9BTE6 412 aaKnown RBP1.85□□□□□ -2.11
LMBR1-222ENST00000638959 IER2Q9BTL4 223 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 SPON1Q9HCB6 807 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 CATSPERZQ9NTU4 200 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 DNAI1Q9UI46 699 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 USP15Q9Y4E8 981 aaPredicted RBP1.85□□□□□ -2.11
LMBR1-222ENST00000638959 ASB1Q9Y576 335 aa1.85□□□□□ -2.11
LMBR1-222ENST00000638959 LINC01548A6NM66 108 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 PRSS47A8MTI9 375 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 AMY2AP04746 511 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 AMY2BP19961 511 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 DOK3Q7L591 496 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 NEK8Q86SG6 692 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 AMIGO2Q86SJ2 522 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 OSTM1Q86WC4 334 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 XYLT1Q86Y38 959 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 ERCC4Q92889 916 aaPredicted RBP1.84□□□□□ -2.11
LMBR1-222ENST00000638959 ARMC5Q96C12 935 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 DYDC2Q96IM9 177 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 TIMP4Q99727 224 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 SPRTNQ9H040 489 aaPredicted RBP1.84□□□□□ -2.11
LMBR1-222ENST00000638959 TBCCD1Q9NVR7 557 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 POLR3BQ9NW08 1133 aaPredicted RBP1.84□□□□□ -2.11
LMBR1-222ENST00000638959 CLCA2Q9UQC9 943 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 CCDC9Q9Y3X0 531 aaKnown RBP1.84□□□□□ -2.11
LMBR1-222ENST00000638959 WNT6Q9Y6F9 365 aa1.84□□□□□ -2.11
LMBR1-222ENST00000638959 TCF20Q9UGU0 1960 aaKnown RBP1.84□□□□□ -2.11
LMBR1-222ENST00000638959 NRP1O14786 923 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 FOXP2O15409 715 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 MTSS1O43312 755 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 ORC4O43929 436 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 SUSD5O60279 629 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 DLX3O60479 287 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 TOP3BO95985 862 aaKnown RBP1.83□□□□□ -2.12
LMBR1-222ENST00000638959 CD1AP06126 327 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 HSP90B1P14625 803 aaKnown RBP1.83□□□□□ -2.12
LMBR1-222ENST00000638959 HNRNPLP14866 589 aaKnown RBP eCLIP1.83□□□□□ -2.12
LMBR1-222ENST00000638959 MMP13P45452 471 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 JAM2P57087 298 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 ALDH6A1Q02252 535 aaKnown RBP1.83□□□□□ -2.12
LMBR1-222ENST00000638959 SPDYE7PQ495Y7 208 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 TSTD2Q5T7W7 516 aa1.83□□□□□ -2.12
LMBR1-222ENST00000638959 ZNF782Q6ZMW2 699 aaPredicted RBP1.83□□□□□ -2.12
LMBR1-222ENST00000638959 YTHDF3Q7Z739 585 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms