RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 ZMYND12Q9H0C1 365 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 OCEL1Q9H607 264 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 AZI2Q9H6S1 392 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 DCLRE1BQ9H816 532 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 FGFR1OP2Q9NVK5 253 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 TMEM260Q9NX78 707 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 COMMD3-BMI1R4GMX3 469 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 ANKRD31Q8N7Z5 1873 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 M0R2N6 131 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 MAFGO15525 162 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 TJP3O95049 919 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 KCNA3P22001 575 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 KLRC1P26715 233 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 IFNAR2P48551 515 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 FAM13CQ8NE31 585 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 FAM207AQ9NSI2 230 aaPredicted RBP13.04□□□□□ -0.32
GFAP-228ENST00000638488 MTMR4Q9NYA4 1195 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 LARSQ9P2J5 1176 aaKnown RBP13.04□□□□□ -0.32
GFAP-228ENST00000638488 MYH4Q9Y623 1939 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 SERPING1P05155 500 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 FAM200BP0CF97 657 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
GFAP-228ENST00000638488 SERPINB4P48594 390 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 PMS2P54278 862 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 Q4G0T1 1027 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 ARL6IP4Q66PJ3 421 aaKnown RBP13.04□□□□□ -0.32
GFAP-228ENST00000638488 CDC42EP5Q6NZY7 148 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 ZFPM1Q8IX07 1006 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 GATA6Q92908 595 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 NAP1L3Q99457 506 aaPredicted RBP13.04□□□□□ -0.32
GFAP-228ENST00000638488 SPZ1Q9BXG8 430 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 DDX47Q9H0S4 455 aaKnown RBP13.04□□□□□ -0.32
GFAP-228ENST00000638488 C6orf50Q9HD87 102 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 NMRK1Q9NWW6 199 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 KLHL14Q9P2G3 628 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 SERPINB13Q9UIV8 391 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 PACSIN2Q9UNF0 486 aaPredicted RBP13.04□□□□□ -0.32
GFAP-228ENST00000638488 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
GFAP-228ENST00000638488 NOC2LQ9Y3T9 749 aaKnown RBP13.04□□□□□ -0.32
GFAP-228ENST00000638488 CEP104O60308 925 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 AFPP02771 609 aaKnown RBP13.03□□□□□ -0.32
GFAP-228ENST00000638488 LSAMPQ13449 338 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 RCN2Q14257 317 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 KPNB1Q14974 876 aaKnown RBP13.03□□□□□ -0.32
GFAP-228ENST00000638488 RASGEF1CQ8N431 466 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 TEKT1Q969V4 418 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 GRAMD1AQ96CP6 724 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 MIS12Q9H081 205 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 CARD9Q9H257 536 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 DPH5Q9H2P9 285 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 TMEM165Q9HC07 324 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 ADAMTSL1Q8N6G6 1762 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 TCP11X1B4DZS4 312 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 KRIT1O00522 736 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 EYA4O95677 639 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 OATP04181 439 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 GM2AP17900 193 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 CHRNA5P30532 468 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 SLC16A2P36021 539 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 UBA7P41226 1012 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 NT5C2P49902 561 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 IFI35P80217 286 aaPredicted RBP13.03□□□□□ -0.32
GFAP-228ENST00000638488 NONOQ15233 471 aaKnown RBP eCLIP13.03□□□□□ -0.32
GFAP-228ENST00000638488 MAN2A1Q16706 1144 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 CNPY1Q3B7I2 92 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 COBLL1Q53SF7 1204 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 TDRD12Q587J7 1177 aaKnown RBP13.03□□□□□ -0.32
GFAP-228ENST00000638488 ANKRD40Q6AI12 368 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 SPATA16Q9BXB7 569 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 MMRN2Q9H8L6 949 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 AMACRQ9UHK6 382 aa13.03□□□□□ -0.32
GFAP-228ENST00000638488 ZBTB48P10074 688 aaPredicted RBP13.02□□□□□ -0.32
GFAP-228ENST00000638488 MCL1Q07820 350 aa13.02□□□□□ -0.32
GFAP-228ENST00000638488 SLC18A3Q16572 532 aa13.02□□□□□ -0.32
GFAP-228ENST00000638488 SHROOM1Q2M3G4 852 aaPredicted RBP13.02□□□□□ -0.32
GFAP-228ENST00000638488 MFSD5Q6N075 450 aa13.02□□□□□ -0.32
GFAP-228ENST00000638488 SLC17A8Q8NDX2 589 aa13.02□□□□□ -0.32
GFAP-228ENST00000638488 TBCKQ8TEA7 893 aa13.02□□□□□ -0.32
GFAP-228ENST00000638488 DDX23Q9BUQ8 820 aaKnown RBP13.02□□□□□ -0.32
GFAP-228ENST00000638488 CETN3O15182 167 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 TTI1O43156 1089 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 HLA-DOAP06340 250 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 GNA11P29992 359 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 TECP42680 631 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 MAGEA10P43363 369 aaPredicted RBP13.02□□□□□ -0.33
GFAP-228ENST00000638488 CRKP46108 304 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 GABPAQ06546 454 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 PPP2R5EQ16537 467 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 TTBK2Q6IQ55 1244 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 KCTD1Q719H9 257 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 RNF168Q8IYW5 571 aaPredicted RBP13.02□□□□□ -0.33
GFAP-228ENST00000638488 LRRC8CQ8TDW0 803 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 RMDN2Q96LZ7 410 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 NR1H4Q96RI1 486 aaPredicted RBP13.02□□□□□ -0.33
GFAP-228ENST00000638488 AP1M1Q9BXS5 423 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 MAF1Q9H063 256 aa13.02□□□□□ -0.33
GFAP-228ENST00000638488 MAGEF1Q9HAY2 307 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms