RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 NPTXRO95502 500 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 BRD1O95696 1058 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 PRKCBP05771 671 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 NAMPTP43490 491 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 GPM6BQ13491 265 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 TMEM132AQ24JP5 1023 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 ARSHQ5FYA8 562 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 LRRC55Q6ZSA7 311 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 ABI1Q8IZP0 508 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 PDILTQ8N807 584 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 CASD1Q96PB1 797 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 TMEM117Q9H0C3 514 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 ELAC1Q9H777 363 aaKnown RBP13.83□□□□□ -0.2
CLN6-225ENST00000638144 TYW1Q9NV66 732 aaKnown RBP13.83□□□□□ -0.2
CLN6-225ENST00000638144 MTCH2Q9Y6C9 303 aa13.83□□□□□ -0.2
CLN6-225ENST00000638144 SLC16A4O15374 487 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 NCLP19338 710 aaKnown RBP13.82□□□□□ -0.2
CLN6-225ENST00000638144 GUCY2CP25092 1073 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 BMPR1AP36894 532 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 NPTX2P47972 431 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 AFF1P51825 1210 aaKnown RBP13.82□□□□□ -0.2
CLN6-225ENST00000638144 POU5F1BQ06416 359 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 DMP1Q13316 513 aaPredicted RBP13.82□□□□□ -0.2
CLN6-225ENST00000638144 PPP2R5AQ15172 486 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 TPRNQ4KMQ1 711 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 EEF1DP3Q658K8 133 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 NOTUMQ6P988 496 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 SMG8Q8ND04 991 aaKnown RBP13.82□□□□□ -0.2
CLN6-225ENST00000638144 LARP4BQ92615 738 aaKnown RBP13.82□□□□□ -0.2
CLN6-225ENST00000638144 CLP1Q92989 425 aaKnown RBP13.82□□□□□ -0.2
CLN6-225ENST00000638144 DRC1Q96MC2 740 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 REEP2Q9BRK0 252 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 NFKBIZQ9BYH8 718 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 RNF39Q9H2S5 420 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 NXF3Q9H4D5 531 aaKnown RBP13.82□□□□□ -0.2
CLN6-225ENST00000638144 ALG13Q9NP73 1137 aaKnown RBP13.82□□□□□ -0.2
CLN6-225ENST00000638144 IPPQ9Y573 584 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 CNTNAP2Q9UHC6 1331 aa13.82□□□□□ -0.2
CLN6-225ENST00000638144 GRM6O15303 877 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 GTPBP6O43824 516 aaPredicted RBP13.81□□□□□ -0.2
CLN6-225ENST00000638144 B4GALT3O60512 393 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 YEATS4O95619 227 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 KRT18P05783 430 aaKnown RBP13.81□□□□□ -0.2
CLN6-225ENST00000638144 TXLNAP40222 546 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 RAB27AP51159 221 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 PRPF4BQ13523 1007 aaKnown RBP13.81□□□□□ -0.2
CLN6-225ENST00000638144 MAPK6Q16659 721 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 NAALADL2Q58DX5 795 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 AGMOQ6ZNB7 445 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 TAS1R3Q7RTX0 852 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 KLHL23Q8NBE8 558 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 SAMD11Q96NU1 681 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 GBP3Q9H0R5 595 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 C2orf40Q9H1Z8 148 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 FZD8Q9H461 694 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 ZHX3Q9H4I2 956 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 PDZD7Q9H5P4 517 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 CWH43Q9H720 699 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 KMT5AQ9NQR1 393 aa13.81□□□□□ -0.2
CLN6-225ENST00000638144 PRMT7Q9NVM4 692 aaPredicted RBP13.81□□□□□ -0.2
CLN6-225ENST00000638144 TDRD15B5MCY1 1934 aaKnown RBP13.8□□□□□ -0.2
CLN6-225ENST00000638144 H3BNC9 293 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 HOXA2O43364 376 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 SLC26A4O43511 780 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 EOMESO95936 686 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 ITGB1P05556 798 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 STAT6P42226 847 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 ME1P48163 572 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 RRAGBQ5VZM2 374 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 SHC4Q6S5L8 630 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 GLB1LQ6UWU2 654 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 DYMQ7RTS9 669 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 LRRC43Q8N309 656 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 COLGALT1Q8NBJ5 622 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 C11orf84Q9BUA3 381 aaPredicted RBP13.8□□□□□ -0.2
CLN6-225ENST00000638144 TRAIPQ9BWF2 469 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 TRIM6Q9C030 488 aaPredicted RBP13.8□□□□□ -0.2
CLN6-225ENST00000638144 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
CLN6-225ENST00000638144 CCDC39Q9UFE4 941 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 PCDHGC5Q9Y5F6 944 aa13.8□□□□□ -0.2
CLN6-225ENST00000638144 A0A1B0GUA9 196 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 NT5C1B-RDH14C9J2C7 533 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 C5orf67F2Z3F1 127 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 ZNF623O75123 536 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 ZC3H11AO75152 810 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLN6-225ENST00000638144 PPP6R2O75170 966 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 OFD1O75665 1012 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 FAM13AO94988 1023 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 SKIP12755 728 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 ITGA4P13612 1032 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 PLS3P13797 630 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 AKAP5P24588 427 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 DNAJB1P25685 340 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 AXLP30530 894 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 MLH1P40692 756 aa13.79□□□□□ -0.2
CLN6-225ENST00000638144 NCBP1Q09161 790 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms