RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 A0A0U1RQG5 324 aaPredicted RBP23.32■■□□□ 1.32
CLN6-224ENST00000638076 SPATA31C2B4DYI2 1134 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 USP2O75604 605 aaPredicted RBP23.32■■□□□ 1.32
CLN6-224ENST00000638076 STAM2O75886 525 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 GLE1Q53GS7 698 aaKnown RBP23.32■■□□□ 1.32
CLN6-224ENST00000638076 SPIRE2Q8WWL2 714 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 NTPCRQ9BSD7 190 aaKnown RBP23.32■■□□□ 1.32
CLN6-224ENST00000638076 SEPT11Q9NVA2 429 aaKnown RBP23.32■■□□□ 1.32
CLN6-224ENST00000638076 SEPT9Q9UHD8 586 aaPredicted RBP23.32■■□□□ 1.32
CLN6-224ENST00000638076 HPCAL4Q9UM19 191 aa23.32■■□□□ 1.32
CLN6-224ENST00000638076 PFASO15067 1338 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 MYPNQ86TC9 1320 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 PRKCEQ02156 737 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 ABHD15Q6UXT9 468 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 AENQ8WTP8 325 aaKnown RBP23.31■■□□□ 1.32
CLN6-224ENST00000638076 C17orf75Q9HAS0 396 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 CES2O00748 559 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 DGAT1O75907 488 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 GYS2P54840 703 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 SH3D19Q5HYK7 790 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 PEX26Q7Z412 305 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 SLFN11Q7Z7L1 901 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 DAAM2Q86T65 1068 aa23.31■■□□□ 1.32
CLN6-224ENST00000638076 TMEM253P0C7T8 217 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 ABCB4P21439 1286 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 DLK2Q6UY11 383 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 USP38Q8NB14 1042 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 OSGEPQ9NPF4 335 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 PDLIM7Q9NR12 457 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 TAS2R14Q9NYV8 317 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 DOCK5Q9H7D0 1870 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 WDR81Q562E7 1941 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 FAM170AA1A519 330 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 SP2Q02086 613 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 VGLL4Q14135 290 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 HSP90B2PQ58FF3 399 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.3■■□□□ 1.32
CLN6-224ENST00000638076 PALB2Q86YC2 1186 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 SYCE1Q8N0S2 351 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 MCPH1Q8NEM0 835 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 SLC35G2Q8TBE7 412 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 CTNNBL1Q8WYA6 563 aaPredicted RBP23.3■■□□□ 1.32
CLN6-224ENST00000638076 VTI1AQ96AJ9 217 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 CCDC127Q96BQ5 260 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 PBKQ96KB5 322 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 AGPAT1Q99943 283 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 XPNPEP1Q9NQW7 623 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 CYP26B1Q9NR63 512 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 SNCAIPQ9Y6H5 919 aa23.3■■□□□ 1.32
CLN6-224ENST00000638076 ADGRA3Q8IWK6 1321 aa23.29■■□□□ 1.32
CLN6-224ENST00000638076 PMM2O15305 246 aa23.29■■□□□ 1.32
CLN6-224ENST00000638076 MAP2K1Q02750 393 aaPredicted RBP23.29■■□□□ 1.32
CLN6-224ENST00000638076 SLC39A4Q6P5W5 647 aa23.29■■□□□ 1.32
CLN6-224ENST00000638076 SLC20A1Q8WUM9 679 aa23.29■■□□□ 1.32
CLN6-224ENST00000638076 RFFLQ8WZ73 363 aa23.29■■□□□ 1.32
CLN6-224ENST00000638076 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.29■■□□□ 1.325e-7■■■■■ 90.8
CLN6-224ENST00000638076 NCANO14594 1321 aa23.29■■□□□ 1.32
CLN6-224ENST00000638076 PEX10O60683 326 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 MCCD1P59942 119 aaPredicted RBP23.28■■□□□ 1.32
CLN6-224ENST00000638076 STXBP2Q15833 593 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 TREML2Q5T2D2 321 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 MIS18BP1Q6P0N0 1132 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 PARD3BQ8TEW8 1205 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 KAT5Q92993 513 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 KRT12Q99456 494 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 ATP6V0A4Q9HBG4 840 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 VPS18Q9P253 973 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 STXBP5LQ9Y2K9 1186 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 IGSF9BQ9UPX0 1349 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 CNTN2Q02246 1040 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 NT5DC3Q86UY8 548 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 ANKRD35Q8N283 1001 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 POP1Q99575 1024 aaKnown RBP23.28■■□□□ 1.32
CLN6-224ENST00000638076 MAF1Q9H063 256 aa23.28■■□□□ 1.32
CLN6-224ENST00000638076 SUCLA2Q9P2R7 463 aaPredicted RBP23.28■■□□□ 1.32
CLN6-224ENST00000638076 CEP104O60308 925 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 SUPT20HL2P0C7V6 817 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 ZBTB48P10074 688 aaPredicted RBP23.27■■□□□ 1.32
CLN6-224ENST00000638076 FSTL1Q12841 308 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 CYFIP1Q7L576 1253 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 METTL13Q8N6R0 699 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 CHST13Q8NET6 341 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 FAM71BQ8TC56 605 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 POMGNT1Q8WZA1 660 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 MED4Q9NPJ6 270 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 TMEM59LQ9UK28 342 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 ADAM21Q9UKJ8 722 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 GLI1P08151 1106 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 USP8P40818 1118 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 AARSP49588 968 aaKnown RBP eCLIP23.27■■□□□ 1.321e-7■■■■■ 41.2
CLN6-224ENST00000638076 MTERF2Q49AM1 385 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 KRT39Q6A163 491 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 DNERQ8NFT8 737 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 ACTRT1Q8TDG2 376 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 SEMA4DQ92854 862 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 THAP2Q9H0W7 228 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 FAN1Q9Y2M0 1017 aa23.27■■□□□ 1.32
CLN6-224ENST00000638076 ARID2Q68CP9 1835 aa23.26■■□□□ 1.31
CLN6-224ENST00000638076 HNRNPDLO14979 420 aaKnown RBP23.26■■□□□ 1.31
CLN6-224ENST00000638076 TNFRSF8P28908 595 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms