RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 CD44P16070 742 aaKnown RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 PTPN2P17706 415 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 GM2AP17900 193 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 GNAT2P19087 354 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 MARK3P27448 753 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 CDC25AP30304 524 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 MAP3K10Q02779 954 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 GIT2Q14161 759 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 CNGA2Q16280 664 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 ZCWPW2Q504Y3 356 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 IL23RQ5VWK5 629 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 STOX1Q6ZVD7 989 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 TMTC3Q6ZXV5 915 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 ACAD11Q709F0 780 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 VPS37DQ86XT2 251 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 TRIM50Q86XT4 487 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 USP38Q8NB14 1042 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 OR2W6PQ8NHA6 318 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 MDM1Q8TC05 714 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 ZNF507Q8TCN5 953 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 NEUROD6Q96NK8 337 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 PYM1Q9BRP8 204 aaKnown RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 RTFDC1Q9BY42 306 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 IFIH1Q9BYX4 1025 aaKnown RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 SLITRK6Q9H5Y7 841 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 NCOA5Q9HCD5 579 aaKnown RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 TAB2Q9NYJ8 693 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 TLR7Q9NYK1 1049 aaKnown RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 THEGQ9P2T0 379 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 CNOT7Q9UIV1 285 aaKnown RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 FBXO2Q9UK22 296 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 HBS1LQ9Y450 684 aaKnown RBP8.45□□□□□ -1.06
CDKL5-211ENST00000637881 PCDHA13Q9Y5I0 950 aa8.45□□□□□ -1.06
CDKL5-211ENST00000637881 DCDC2CA8MYV0 355 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 POLR2DO15514 142 aaKnown RBP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 NDUFB5O43674 189 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 AP1G1O43747 822 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 MTRF1O75570 445 aaKnown RBP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 DCTN3O75935 186 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 MOCS3O95396 460 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 LDHAP00338 332 aaKnown RBP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 CSF1RP07333 972 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 SRGNP10124 158 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 CDK4P11802 303 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 HOXD10P28358 340 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 PPIDQ08752 370 aaKnown RBP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 PAK1Q13153 545 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 HNRNPDQ14103 355 aaKnown RBP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 NONOQ15233 471 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 MCMDC2Q4G0Z9 681 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 EAPPQ56P03 285 aaPredicted RBP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 TNFAIP8L3Q5GJ75 292 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 KLHDC7AQ5VTJ3 777 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 ARHGAP27Q6ZUM4 889 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 HS2ST1Q7LGA3 356 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 SLC51AQ86UW1 340 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 AACSQ86V21 672 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 SUPT20HQ8NEM7 779 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 CELF1Q92879 486 aaKnown RBP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 EFHD2Q96C19 240 aaPredicted RBP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 CCDC42Q96M95 316 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 CCT7Q99832 543 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 PRMT1Q99873 361 aaKnown RBP8.44□□□□□ -1.06
CDKL5-211ENST00000637881 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 HGH1Q9BTY7 390 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 TUBB6Q9BUF5 446 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 VPS16Q9H269 839 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 CNNM1Q9NRU3 951 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 CCPG1Q9ULG6 757 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 CTNND2Q9UQB3 1225 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 USH1CQ9Y6N9 552 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 UTRNP46939 3433 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 ZNF609O15014 1411 aa8.44□□□□□ -1.06
CDKL5-211ENST00000637881 SH3PXD2BA1X283 911 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 ZSCAN5CA6NGD5 496 aaPredicted RBP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 NDC80O14777 642 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 RGS16O15492 202 aaPredicted RBP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 MSL3P1P0C860 447 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 HSPA8P11142 646 aaKnown RBP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 NPR1P16066 1061 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 IGHMBP2P38935 993 aaKnown RBP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 YARSP54577 528 aaKnown RBP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 RPS8P62241 208 aaKnown RBP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 XIAPP98170 497 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 RASSF7Q02833 373 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 RELAQ04206 551 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 SF3B3Q15393 1217 aaKnown RBP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 WDR72Q3MJ13 1102 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 ZNF362Q5T0B9 420 aaPredicted RBP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 MFSD5Q6N075 450 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 BORAQ6PGQ7 559 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 LDHAL6AQ6ZMR3 332 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 C11orf74Q86VG3 221 aa8.43□□□□□ -1.06
CDKL5-211ENST00000637881 DDX42Q86XP3 938 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 RIBC1Q8N443 379 aaPredicted RBP8.43□□□□□ -1.06
CDKL5-211ENST00000637881 MASTLQ96GX5 879 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms