RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 VPS52Q8N1B4 723 aa22.36■■□□□ 1.17
CLN6-222ENST00000637667 URGCPQ8TCY9 931 aa22.36■■□□□ 1.17
CLN6-222ENST00000637667 IGSF21Q96ID5 467 aa22.36■■□□□ 1.17
CLN6-222ENST00000637667 C8orf76Q96K31 380 aa22.36■■□□□ 1.17
CLN6-222ENST00000637667 CCDC43Q96MW1 224 aaKnown RBP22.36■■□□□ 1.17
CLN6-222ENST00000637667 GBP3Q9H0R5 595 aa22.36■■□□□ 1.17
CLN6-222ENST00000637667 RSAD1Q9HA92 442 aa22.36■■□□□ 1.17
CLN6-222ENST00000637667 CNTNAP2Q9UHC6 1331 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 POTEMA6NI47 508 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 ERLIN2O94905 339 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 CXCL14O95715 111 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 HOXB8P17481 243 aaPredicted RBP22.35■■□□□ 1.17
CLN6-222ENST00000637667 MCM7P33993 719 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 SLC11A1P49279 550 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 RARRES1P49788 294 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 CBX2Q14781 532 aaPredicted RBP22.35■■□□□ 1.17
CLN6-222ENST00000637667 PCBP1Q15365 356 aaKnown RBP eCLIP22.35■■□□□ 1.17
CLN6-222ENST00000637667 DDX53Q86TM3 631 aaKnown RBP22.35■■□□□ 1.17
CLN6-222ENST00000637667 IFNLR1Q8IU57 520 aaPredicted RBP22.35■■□□□ 1.17
CLN6-222ENST00000637667 ASAP3Q8TDY4 903 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 BCL7CQ8WUZ0 217 aaPredicted RBP22.35■■□□□ 1.17
CLN6-222ENST00000637667 CASP10Q92851 521 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 LLPHQ9BRT6 129 aaKnown RBP22.35■■□□□ 1.17
CLN6-222ENST00000637667 ZBP1Q9H171 429 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 DNAJB4Q9UDY4 337 aa22.35■■□□□ 1.17
CLN6-222ENST00000637667 B4GALT3O60512 393 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 CLASP2O75122 1294 aaKnown RBP22.34■■□□□ 1.17
CLN6-222ENST00000637667 CA8P35219 290 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 ARL2P36404 184 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 POU5F1BQ06416 359 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 ZNF280BQ86YH2 543 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 PIGOQ8TEQ8 1089 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 CCDC51Q96ER9 411 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 RPGRIP1Q96KN7 1286 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 APOL5Q9BWW9 433 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 HCFC2Q9Y5Z7 792 aa22.34■■□□□ 1.17
CLN6-222ENST00000637667 PIEZO1Q92508 2521 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 A0A087WWV3 80 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.33■■□□□ 1.17
CLN6-222ENST00000637667 INO80B-WBP1J3KQ70 363 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 TSPAN1O60635 241 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 CTSAP10619 480 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 XRCC6P12956 609 aaKnown RBP eCLIP22.33■■□□□ 1.17
CLN6-222ENST00000637667 NCLP19338 710 aaKnown RBP22.33■■□□□ 1.17
CLN6-222ENST00000637667 AXLP30530 894 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 AFF1P51825 1210 aaKnown RBP22.33■■□□□ 1.17
CLN6-222ENST00000637667 CAPSQ13938 189 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 NOTUMQ6P988 496 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 SMG8Q8ND04 991 aaKnown RBP22.33■■□□□ 1.17
CLN6-222ENST00000637667 CNNM3Q8NE01 707 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 KANSL3Q9P2N6 904 aa22.33■■□□□ 1.17
CLN6-222ENST00000637667 TECTAO75443 2155 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 CENPBP07199 599 aaPredicted RBP22.32■■□□□ 1.16
CLN6-222ENST00000637667 SPATA31C1P0DKV0 1188 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 GLRA2P23416 452 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 MBTD1Q05BQ5 628 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 NCBP1Q09161 790 aaKnown RBP22.32■■□□□ 1.16
CLN6-222ENST00000637667 TPRNQ4KMQ1 711 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 TMEM87AQ8NBN3 555 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 AUTS2Q8WXX7 1259 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 CPB2Q96IY4 423 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 ZSCAN31Q96LW9 406 aaPredicted RBP22.32■■□□□ 1.16
CLN6-222ENST00000637667 EIF2AQ9BY44 585 aaKnown RBP22.32■■□□□ 1.16
CLN6-222ENST00000637667 POLR3FQ9H1D9 316 aaPredicted RBP22.32■■□□□ 1.16
CLN6-222ENST00000637667 FOXP1Q9H334 677 aaPredicted RBP22.32■■□□□ 1.16
CLN6-222ENST00000637667 TUFT1Q9NNX1 390 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 IRAK3Q9Y616 596 aa22.32■■□□□ 1.16
CLN6-222ENST00000637667 USO1O60763 962 aaKnown RBP22.31■■□□□ 1.16
CLN6-222ENST00000637667 DDHD2O94830 711 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 ITGA4P13612 1032 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 HMGN5P82970 282 aaKnown RBP22.31■■□□□ 1.16
CLN6-222ENST00000637667 GIT2Q14161 759 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 ZNF174Q15697 407 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 AMHR2Q16671 573 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 EDAQ92838 391 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 FAM193BQ96PV7 902 aaPredicted RBP22.31■■□□□ 1.16
CLN6-222ENST00000637667 TMEM175Q9BSA9 504 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 VN1R3Q9BXE9 311 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 NFKBIZQ9BYH8 718 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 CSRNP2Q9H175 543 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 UBN1Q9NPG3 1134 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 IPPQ9Y573 584 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 ARID2Q68CP9 1835 aa22.31■■□□□ 1.16
CLN6-222ENST00000637667 TRIOO75962 3097 aa22.3■■□□□ 1.16
CLN6-222ENST00000637667 POMCP01189 267 aa22.3■■□□□ 1.16
CLN6-222ENST00000637667 OR52Z1P0C646 297 aa22.3■■□□□ 1.16
CLN6-222ENST00000637667 ORC2Q13416 577 aaPredicted RBP22.3■■□□□ 1.16
CLN6-222ENST00000637667 CATSPER3Q86XQ3 398 aa22.3■■□□□ 1.16
CLN6-222ENST00000637667 FBXO18Q8NFZ0 1043 aa22.3■■□□□ 1.16
CLN6-222ENST00000637667 KIF2CQ99661 725 aa22.3■■□□□ 1.16
CLN6-222ENST00000637667 SH2B1Q9NRF2 756 aaPredicted RBP22.3■■□□□ 1.16
CLN6-222ENST00000637667 ZDBF2Q9HCK1 2354 aa22.3■■□□□ 1.16
CLN6-222ENST00000637667 INPPL1O15357 1258 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 MED24O75448 989 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 ALDH2P05091 517 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 ARF4P18085 180 aaPredicted RBP22.29■■□□□ 1.16
CLN6-222ENST00000637667 RBM25P49756 843 aaKnown RBP22.29■■□□□ 1.16
CLN6-222ENST00000637667 CES5AQ6NT32 575 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 HFE2Q6ZVN8 426 aa22.29■■□□□ 1.16
CLN6-222ENST00000637667 NACC1Q96RE7 527 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms