RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 SPECC1LQ69YQ0 1117 aa16.75■□□□□ 0.27
CTSD-211ENST00000637387 ARMCX5Q6P1M9 558 aa16.75■□□□□ 0.27
CTSD-211ENST00000637387 MKNK1Q9BUB5 465 aa16.75■□□□□ 0.27
CTSD-211ENST00000637387 NOC4LQ9BVI4 516 aaKnown RBP16.75■□□□□ 0.27
CTSD-211ENST00000637387 NDST4Q9H3R1 872 aa16.75■□□□□ 0.27
CTSD-211ENST00000637387 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.75■□□□□ 0.27
CTSD-211ENST00000637387 CGNQ9P2M7 1197 aaKnown RBP16.75■□□□□ 0.27
CTSD-211ENST00000637387 NR2E3Q9Y5X4 410 aa16.75■□□□□ 0.27
CTSD-211ENST00000637387 GOLGA6L6A8MZA4 724 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 MAGEB2O15479 319 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 MYL3P08590 195 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 SMIM10L2AP0DMW4 78 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 SMIM10L2BP0DMW5 78 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 CNGA1P29973 690 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 CYP2J2P51589 502 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 SNRPFP62306 86 aaKnown RBP16.74■□□□□ 0.27
CTSD-211ENST00000637387 MXD4Q14582 209 aaPredicted RBP16.74■□□□□ 0.27
CTSD-211ENST00000637387 FRMD5Q7Z6J6 570 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 DEPTORQ8TB45 409 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 CACTINQ8WUQ7 758 aaKnown RBP16.74■□□□□ 0.27
CTSD-211ENST00000637387 PRO3102Q9H379 93 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 TMEM134Q9H6X4 195 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 SETD4Q9NVD3 440 aa16.74■□□□□ 0.27
CTSD-211ENST00000637387 SUCLA2Q9P2R7 463 aaPredicted RBP16.74■□□□□ 0.27
CTSD-211ENST00000637387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.74■□□□□ 0.273e-10■□□□□ 9.8
CTSD-211ENST00000637387 A0A1W2PQC6 194 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 MBLAC1A4D2B0 266 aaPredicted RBP16.73■□□□□ 0.27
CTSD-211ENST00000637387 PGK1P00558 417 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 C6orf222P0C671 652 aaPredicted RBP16.73■□□□□ 0.27
CTSD-211ENST00000637387 COL6A1P12109 1028 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 SCP2P22307 547 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 DNM2P50570 870 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 UBXN1Q04323 297 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 RHPN2Q8IUC4 686 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 RNF149Q8NC42 400 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 ZNF830Q96NB3 372 aaPredicted RBP16.73■□□□□ 0.27
CTSD-211ENST00000637387 ERGIC2Q96RQ1 377 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 HSPBP1Q9NZL4 362 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 KCNG1Q9UIX4 513 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 EXOC7Q9UPT5 735 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 USP20Q9Y2K6 914 aa16.73■□□□□ 0.27
CTSD-211ENST00000637387 TTLL13PA6NNM8 815 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 EVI5O60447 810 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 MSCO60682 206 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 GYPCP04921 128 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 RARBP10826 455 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 EPB41P11171 864 aaKnown RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 ABCD1P33897 745 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 KLK7P49862 253 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 LRMPQ12912 555 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 BRDTQ58F21 947 aaPredicted RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 CCSAPQ6IQ19 270 aaPredicted RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 CCDC155Q8N6L0 562 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 METTL13Q8N6R0 699 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 RETREG2Q8NC44 543 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 SLC35C1Q96A29 364 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 TRIM44Q96DX7 344 aaPredicted RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 ZNF668Q96K58 619 aaPredicted RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 HAPLN2Q9GZV7 340 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 PCIF1Q9H4Z3 704 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 C11orf49Q9H6J7 331 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 ARMCX3Q9UH62 379 aaPredicted RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 SIK3Q9Y2K2 1263 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 STYXL1Q9Y6J8 313 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 NRCAMQ92823 1304 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 HNRNPDLO14979 420 aaKnown RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 ADRB2P07550 413 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 CST5P28325 142 aaPredicted RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 PSMC2P35998 433 aaKnown RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 MCCD1P59942 119 aaPredicted RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 PTENP60484 403 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 GOLGA8FQ08AF8 430 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 GOLGA8DPQ0D2H9 430 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 IFNLR1Q8IU57 520 aaPredicted RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 FAM186BQ8IYM0 893 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 KLHDC9Q8NEP7 349 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 FBXL18Q96ME1 805 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 NFKBIZQ9BYH8 718 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 TTYH3Q9C0H2 523 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 MINDY3Q9H8M7 445 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 IFT122Q9HBG6 1241 aa16.72■□□□□ 0.27
CTSD-211ENST00000637387 DDX20Q9UHI6 824 aaKnown RBP16.72■□□□□ 0.27
CTSD-211ENST00000637387 RALGAPA2Q2PPJ7 1873 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 RRN3P2A6NIE6 340 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 K7ERI5 159 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 VTNP04004 478 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 SRGAP2CP0DJJ0 459 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 CCZ1BP86790 482 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 CCZ1P86791 482 aaPredicted RBP16.71■□□□□ 0.27
CTSD-211ENST00000637387 MBTD1Q05BQ5 628 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 SYCP1Q15431 976 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 NFRKBQ6P4R8 1299 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 KIAA0319LQ8IZA0 1049 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 TC2NQ8N9U0 490 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 XXYLT1Q8NBI6 393 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 PLEKHO2Q8TD55 490 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 NLRP4Q96MN2 994 aa16.71■□□□□ 0.27
CTSD-211ENST00000637387 KATNAL1Q9BW62 490 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms