RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 KREMEN1Q96MU8 473 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 GTPBP10A4D1E9 387 aaKnown RBP20.45■□□□□ 0.86
CLN5-216ENST00000636780 TTI1O43156 1089 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 FGGP02679 453 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 BCRP11274 1271 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 PTPRAP18433 802 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 CNGA1P29973 690 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 BACE1P56817 501 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 CNTN2Q02246 1040 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 AFAP1L1Q8TED9 768 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 LPAR1Q92633 364 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 ALG3Q92685 438 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 KRT35Q92764 455 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 TATDN2Q93075 761 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 TRIM51Q9BSJ1 452 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 SYT11Q9BT88 431 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 CENPHQ9H3R5 247 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 ERVK-5Q9HDB9 667 aa20.45■□□□□ 0.86
CLN5-216ENST00000636780 EEPD1Q7L9B9 569 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 CCDC60Q8IWA6 550 aaPredicted RBP20.44■□□□□ 0.86
CLN5-216ENST00000636780 MKNK1Q9BUB5 465 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 GDF3Q9NR23 364 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 FER1L6Q2WGJ9 1857 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 MMEP08473 750 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 SNRNP35Q16560 246 aaKnown RBP20.44■□□□□ 0.86
CLN5-216ENST00000636780 DAB2IPQ5VWQ8 1189 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 NOP9Q86U38 636 aaKnown RBP20.44■□□□□ 0.86
CLN5-216ENST00000636780 TXLNBQ8N3L3 684 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 TAS1R2Q8TE23 839 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 CTNNBL1Q8WYA6 563 aaPredicted RBP20.44■□□□□ 0.86
CLN5-216ENST00000636780 AGPAT1Q99943 283 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 VIPAS39Q9H9C1 493 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 MED4Q9NPJ6 270 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 STXBP5LQ9Y2K9 1186 aa20.44■□□□□ 0.86
CLN5-216ENST00000636780 GOLGA6CA6NDK9 693 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 GOLGA6DP0CG33 693 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 EPHB4P54760 987 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 PSMC5P62195 406 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 ITIH3Q06033 890 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 LRRC31Q6UY01 552 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 NLRX1Q86UT6 975 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 IFT20Q8IY31 132 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 TMEM161BQ8NDZ6 487 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 GLG1Q92896 1179 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 GOLGA6AQ9NYA3 693 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 TSKSQ9UJT2 592 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 DAPK3O43293 454 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 MTERF2Q49AM1 385 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 PIK3R5Q8WYR1 880 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 TMEM143Q96AN5 459 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 ZNF668Q96K58 619 aaPredicted RBP20.43■□□□□ 0.86
CLN5-216ENST00000636780 ACBD3Q9H3P7 528 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 SEPT9Q9UHD8 586 aaPredicted RBP20.43■□□□□ 0.86
CLN5-216ENST00000636780 FBXL5Q9UKA1 691 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 TBX20Q9UMR3 447 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 DOCK5Q9H7D0 1870 aa20.43■□□□□ 0.86
CLN5-216ENST00000636780 WDR64B1ANS9 1081 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 ZNF280AP59817 542 aaPredicted RBP20.42■□□□□ 0.86
CLN5-216ENST00000636780 VSIG10LQ86VR7 867 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 ZNF280CQ8ND82 737 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 TBC1D22BQ9NU19 505 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 ZNF233A6NK53 670 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 ACTN2P35609 894 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 MXI1P50539 228 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 GTF2BQ00403 316 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 MESDQ14696 234 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 PPP2R5AQ15172 486 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 SCFD2Q8WU76 684 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 ZBTB45Q96K62 511 aaPredicted RBP20.42■□□□□ 0.86
CLN5-216ENST00000636780 KMT5AQ9NQR1 393 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 KCND2Q9NZV8 630 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 CTTNBP2NLQ9P2B4 639 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 TMEM59LQ9UK28 342 aa20.42■□□□□ 0.86
CLN5-216ENST00000636780 ZNF214Q9UL59 606 aaPredicted RBP20.42■□□□□ 0.86
CLN5-216ENST00000636780 CHRNB2P17787 502 aa20.41■□□□□ 0.86
CLN5-216ENST00000636780 TNFAIP1Q13829 316 aa20.41■□□□□ 0.86
CLN5-216ENST00000636780 NLGN2Q8NFZ4 835 aa20.41■□□□□ 0.86
CLN5-216ENST00000636780 POMGNT1Q8WZA1 660 aa20.41■□□□□ 0.86
CLN5-216ENST00000636780 FAM213AQ9BRX8 229 aa20.41■□□□□ 0.86
CLN5-216ENST00000636780 ECHS1P30084 290 aa20.41■□□□□ 0.86
CLN5-216ENST00000636780 INTS8Q75QN2 995 aaKnown RBP20.41■□□□□ 0.86
CLN5-216ENST00000636780 A1CFQ9NQ94 594 aaKnown RBP20.41■□□□□ 0.86
CLN5-216ENST00000636780 PICK1Q9NRD5 415 aa20.41■□□□□ 0.86
CLN5-216ENST00000636780 DBR1Q9UK59 544 aaKnown RBP20.41■□□□□ 0.86
CLN5-216ENST00000636780 AMFRQ9UKV5 643 aa20.41■□□□□ 0.86
CLN5-216ENST00000636780 ATAD5Q96QE3 1844 aa20.41■□□□□ 0.86
CLN5-216ENST00000636780 TCRBV7S2A1N4TA0A589 114 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 PGRMC1O00264 195 aaKnown RBP20.4■□□□□ 0.86
CLN5-216ENST00000636780 CLSTN1O94985 981 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 ACOT2P49753 483 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 SPOPLQ6IQ16 392 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 SEPT14Q6ZU15 432 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 SLFN11Q7Z7L1 901 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 C4orf19Q8IY42 314 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.4■□□□□ 0.86
CLN5-216ENST00000636780 MOV10L1Q9BXT6 1211 aaKnown RBP20.4■□□□□ 0.86
CLN5-216ENST00000636780 TRIM7Q9C029 511 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 TMEM206Q9H813 350 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 XPNPEP1Q9NQW7 623 aa20.4■□□□□ 0.86
CLN5-216ENST00000636780 GGA3Q9NZ52 723 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms