RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 LCHNA4D1U4 455 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 PRAMEF25A6NGN4 478 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 TRIM75PA6NK02 468 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ZNF839A8K0R7 811 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 PATE3B3GLJ2 98 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 OVOL3O00110 214 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 NPHP1O15259 732 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 RNASEH2AO75792 299 aaKnown RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 FBXO21O94952 628 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 PRLP01236 227 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 CHGBP05060 677 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 HSP90AB1P08238 724 aaKnown RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 MMEP08473 750 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 TGFB3P10600 412 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 CD40P25942 277 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 NEK2P51955 445 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ADCY1Q08828 1119 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 MTA1Q13330 715 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 KLF1Q13351 362 aaPredicted RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ADAM9Q13443 819 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 MORC3Q14149 939 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 TMEM132BQ14DG7 1078 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 TTF1Q15361 905 aaPredicted RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 CDSNQ15517 529 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 LONRF1Q17RB8 773 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ALDH1L2Q3SY69 923 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 HS1BP3Q53T59 392 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 CCDC93Q567U6 631 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 C10orf62Q5T681 223 aaPredicted RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 PPP4R4Q6NUP7 873 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 EP400NLQ6ZTU2 488 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 HDGFL2Q7Z4V5 671 aaPredicted RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ANKRD23Q86SG2 305 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 NME9Q86XW9 330 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 FAM26EQ8N5C1 309 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ERP27Q96DN0 273 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 MTMR8Q96EF0 704 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 AHCYL2Q96HN2 611 aaKnown RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ZNF496Q96IT1 587 aaPredicted RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 GBP4Q96PP9 640 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ZNF747Q9BV97 191 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 AMNQ9BXJ7 453 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ALDH8A1Q9H2A2 487 aaPredicted RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 TOPORSQ9NS56 1045 aaPredicted RBP3.55□□□□□ -1.84
PSPC1-208ENST00000635562 CLIC5Q9NZA1 410 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 POLG2Q9UHN1 485 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 INTUQ9ULD6 942 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ASAP1Q9ULH1 1129 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 HDAC5Q9UQL6 1122 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 PPP2R3BQ9Y5P8 575 aa3.55□□□□□ -1.84
PSPC1-208ENST00000635562 ELL2O00472 640 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 GPR42O15529 346 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 KDM1AO60341 852 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 MAFO75444 373 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 MTA2O94776 668 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 SLPIP03973 132 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 MYL3P08590 195 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 CT47B1P0C2W7 299 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 RBP3P10745 1247 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 MC4RP32245 332 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 IL13P35225 146 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 STAT5AP42229 794 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 GPR3P46089 330 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 EPHB1P54762 984 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 MANFP55145 182 aaKnown RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 ALDH6A1Q02252 535 aaKnown RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 ITKQ08881 620 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 ICAM4Q14773 271 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 CCDC92Q53HC0 331 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 ZBTB41Q5SVQ8 909 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 CCDC70Q6NSX1 233 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 PDXDC1Q6P996 788 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 FRMD7Q6ZUT3 714 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 KANSL1Q7Z3B3 1105 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 CXorf67Q86X51 503 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 CMIPQ8IY22 773 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 KBTBD2Q8IY47 623 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 DTX3Q8N9I9 347 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 C1orf162Q8NEQ5 155 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 MYRIPQ8NFW9 859 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 FBXO41Q8TF61 875 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 RTF1Q92541 710 aaKnown RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 CHMP4CQ96CF2 233 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 MBD6Q96DN6 1003 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 MAML3Q96JK9 1138 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 MYCBPQ99417 103 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 FOXB1Q99853 325 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 SLC13A1Q9BZW2 595 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 SCAND2PQ9GZW5 306 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-208ENST00000635562 PCED1AQ9H1Q7 454 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 SEC61A2Q9H9S3 476 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 C14orf119Q9NWQ9 140 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 ACAD8Q9UKU7 415 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 SLC45A1Q9Y2W3 748 aa3.54□□□□□ -1.84
PSPC1-208ENST00000635562 UBA6A0AVT1 1052 aaPredicted RBP3.53□□□□□ -1.84
PSPC1-208ENST00000635562 SHTN1A0MZ66 631 aa3.53□□□□□ -1.84
PSPC1-208ENST00000635562 DYTNA2CJ06 578 aa3.53□□□□□ -1.84
PSPC1-208ENST00000635562 PRAMEF22A3QJZ6 481 aa3.53□□□□□ -1.84
PSPC1-208ENST00000635562 PRRT4C9JH25 899 aa3.53□□□□□ -1.84
PSPC1-208ENST00000635562 SLC26A4O43511 780 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms