RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 CCDC121Q6ZUS5 278 aa11.56□□□□□ -0.56
PSPC1-207ENST00000635251 TEX2Q8IWB9 1127 aa11.56□□□□□ -0.56
PSPC1-207ENST00000635251 LMO3Q8TAP4 145 aa11.56□□□□□ -0.56
PSPC1-207ENST00000635251 VTI1AQ96AJ9 217 aa11.56□□□□□ -0.56
PSPC1-207ENST00000635251 ACCSQ96QU6 501 aa11.56□□□□□ -0.56
PSPC1-207ENST00000635251 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.56□□□□□ -0.56
PSPC1-207ENST00000635251 ZBTB21Q9ULJ3 1066 aa11.56□□□□□ -0.56
PSPC1-207ENST00000635251 PFASO15067 1338 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 CLRN2A0PK11 232 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 DCDC2CA8MYV0 355 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 H0YIN7 160 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 FSBPO95073 299 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 VCAM1P19320 739 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 HNRNPH1P31943 449 aaKnown RBP11.55□□□□□ -0.56
PSPC1-207ENST00000635251 MYBPC2Q14324 1141 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 DENND2CQ68D51 928 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 C11orf63Q6NUN7 778 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
PSPC1-207ENST00000635251 DAW1Q8N136 415 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 NEK9Q8TD19 979 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 RAPGEF5Q92565 580 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 C18orf8Q96DM3 657 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 MXRA8Q9BRK3 442 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 GGA2Q9UJY4 613 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 COL11A2P13942 1736 aaPredicted RBP11.55□□□□□ -0.56
PSPC1-207ENST00000635251 GOLGA6L7A0A1B0GV03 622 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 TLDC2A0PJX2 215 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 PHF2O75151 1096 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 HMGB2P26583 209 aaKnown RBP11.55□□□□□ -0.56
PSPC1-207ENST00000635251 PPP3CAQ08209 521 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 SPDYCQ5MJ68 293 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 TRMT1LQ7Z2T5 733 aaKnown RBP11.55□□□□□ -0.56
PSPC1-207ENST00000635251 KRT27Q7Z3Y8 459 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 SUGP1Q8IWZ8 645 aaKnown RBP11.55□□□□□ -0.56
PSPC1-207ENST00000635251 CNPY4Q8N129 248 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 XXYLT1Q8NBI6 393 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 C3orf20Q8ND61 904 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 KRT35Q92764 455 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 CABS1Q96KC9 395 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 RIT2Q99578 217 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 CBWD1Q9BRT8 395 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 STRA6Q9BX79 667 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 CNOT10Q9H9A5 744 aaKnown RBP11.55□□□□□ -0.56
PSPC1-207ENST00000635251 LRRC4CQ9HCJ2 640 aa11.55□□□□□ -0.56
PSPC1-207ENST00000635251 CHORDC1Q9UHD1 332 aaPredicted RBP11.55□□□□□ -0.56
PSPC1-207ENST00000635251 DDX20Q9UHI6 824 aaKnown RBP11.55□□□□□ -0.56
PSPC1-207ENST00000635251 SMIM23A6NLE4 172 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 BACH1O14867 736 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 CAND2O75155 1236 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 RTN2O75298 545 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 P4HBP07237 508 aaKnown RBP11.54□□□□□ -0.56
PSPC1-207ENST00000635251 HSPA6P17066 643 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 COMTP21964 271 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 CHRNA3P32297 505 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 HADHBP55084 474 aaKnown RBP11.54□□□□□ -0.56
PSPC1-207ENST00000635251 ALCAMQ13740 583 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 CPLX4Q7Z7G2 160 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 FAM160B2Q86V87 743 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 PRPF38AQ8NAV1 312 aaKnown RBP11.54□□□□□ -0.56
PSPC1-207ENST00000635251 SELENOSQ9BQE4 189 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 ZSWIM1Q9BR11 485 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 ZDHHC18Q9NUE0 388 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 HSPBP1Q9NZL4 362 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.54□□□□□ -0.56
PSPC1-207ENST00000635251 MTRF1LQ9UGC7 380 aaKnown RBP11.54□□□□□ -0.56
PSPC1-207ENST00000635251 PNMA2Q9UL42 364 aa11.54□□□□□ -0.56
PSPC1-207ENST00000635251 SLX4Q8IY92 1834 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 SOCS7O14512 581 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
PSPC1-207ENST00000635251 P4HA2O15460 535 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 ATMINO43313 823 aaPredicted RBP11.53□□□□□ -0.56
PSPC1-207ENST00000635251 SGPL1O95470 568 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 SHBGP04278 402 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 MARCKSL1P49006 195 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 MXI1P50539 228 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 MNAT1P51948 309 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 QPCTQ16769 361 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 GRIPAP1Q4V328 841 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 EPC2Q52LR7 807 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 CACNA2D3Q8IZS8 1091 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 PPM1KQ8N3J5 372 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 FBXO25Q8TCJ0 367 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 TXLNGYQ9BZA5 131 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 PABPC3Q9H361 631 aaKnown RBP11.53□□□□□ -0.56
PSPC1-207ENST00000635251 VCPKMTQ9H867 229 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.53□□□□□ -0.56
PSPC1-207ENST00000635251 SCN9AQ15858 1988 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 SPOPO43791 374 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 PLS3P13797 630 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 FNTAP49354 379 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 ACTN3Q08043 901 aaPredicted RBP11.53□□□□□ -0.56
PSPC1-207ENST00000635251 TBC1D10BQ4KMP7 808 aaPredicted RBP11.53□□□□□ -0.56
PSPC1-207ENST00000635251 GKAP1Q5VSY0 366 aaPredicted RBP11.53□□□□□ -0.56
PSPC1-207ENST00000635251 CCDC137Q6PK04 289 aaKnown RBP11.53□□□□□ -0.56
PSPC1-207ENST00000635251 B3GNT9Q6UX72 402 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 ARMC9Q7Z3E5 817 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
PSPC1-207ENST00000635251 MDM1Q8TC05 714 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms