RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 TUBD1Q9UJT1 453 aa6.29□□□□□ -1.4
TRAPPC9-216ENST00000634178 TMPRSS11EQ9UL52 423 aa6.29□□□□□ -1.4
TRAPPC9-216ENST00000634178 PCDHB6Q9Y5E3 794 aa6.29□□□□□ -1.4
TRAPPC9-216ENST00000634178 KIDINS220Q9ULH0 1771 aa6.29□□□□□ -1.4
TRAPPC9-216ENST00000634178 DNMT1P26358 1616 aaKnown RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 RNF17Q9BXT8 1623 aaKnown RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 A2ML1A8K2U0 1454 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 VWDEQ8N2E2 1590 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 FAM227AF5H4B4 570 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 PCDH8O95206 1070 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 RNASE1P07998 156 aaKnown RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 SSTR4P31391 388 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 PDE6BP35913 854 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 IL12RB1P42701 662 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 WASP42768 502 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 RGS3P49796 1198 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 FAM193AP78312 1265 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 CDK17Q00537 523 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 PFKPQ01813 784 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 PPARAQ07869 468 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 MAP3K12Q12852 859 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 ZNF267Q14586 743 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 ZRSR2Q15696 482 aaKnown RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 THEMIS2Q5TEJ8 643 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 KLHDC10Q6PID8 442 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 ZBTB34Q8NCN2 500 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 GAB3Q8WWW8 586 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 INTS4Q96HW7 963 aaKnown RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 STRBPQ96SI9 672 aaKnown RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 ACO2Q99798 780 aaKnown RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 ELAC2Q9BQ52 826 aaKnown RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 ADI1Q9BV57 179 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 PITHD1Q9GZP4 211 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 RNF32Q9H0A6 362 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 MTG2Q9H4K7 406 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 KMT5AQ9NQR1 393 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 KCMF1Q9P0J7 381 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 USP18Q9UMW8 372 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 WASF3Q9UPY6 502 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 FAM50BQ9Y247 325 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 DEPDC5O75140 1603 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 MED14O60244 1454 aa6.28□□□□□ -1.4
TRAPPC9-216ENST00000634178 SYNMO15061 1565 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 ABCC1P33527 1531 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 A0A0A6YYJ9 748 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 IFRD1O00458 451 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 CUTAO60888 179 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 OPHN1O60890 802 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 MAFO75444 373 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 MED26O95402 600 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 MPIG6BO95866 241 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 MC4RP32245 332 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 TXKP42681 527 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 HTR3AP46098 478 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 NEK3P51956 506 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 GJA9P57773 515 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 TRIM25Q14258 630 aaKnown RBP6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 NOLC1Q14978 699 aaKnown RBP eCLIP6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 PLEKHN1Q494U1 663 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 BTNL9Q6UXG8 535 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 CCDC149Q6ZUS6 474 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 MIGA2Q7L4E1 593 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 CXXC5Q7LFL8 322 aaKnown RBP6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 GLB1L2Q8IW92 636 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 FLAD1Q8NFF5 587 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 TSPEARQ8WU66 669 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 CPA5Q8WXQ8 436 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 HDAC10Q969S8 669 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 KIRREL1Q96J84 757 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 TMEM209Q96SK2 561 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 NOL10Q9BSC4 688 aaKnown RBP6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 OR10A5Q9H207 317 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 TMEM60Q9H2L4 133 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 GREM2Q9H772 168 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 SLC39A2Q9NP94 309 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 DNM3Q9UQ16 869 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 CFAP20Q9Y6A4 193 aaKnown RBP6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 KIF14Q15058 1648 aa6.27□□□□□ -1.41
TRAPPC9-216ENST00000634178 ARID1BQ8NFD5 2236 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 ARHGAP5Q13017 1502 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 HRKO00198 91 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 APAF1O14727 1248 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 TPP1O14773 563 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 TUSC2O75896 110 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 NCAM1P13591 858 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 CACNB3P54284 484 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 USP14P54578 494 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 ZNF280AP59817 542 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 YBX1P67809 324 aaKnown RBP6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 ADRM1Q16186 407 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 MAN2A1Q16706 1144 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 ZNF792Q3KQV3 632 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 DARS2Q6PI48 645 aaKnown RBP6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 UNQ6494/PRO21346Q6UXR6 183 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 BMP8AQ7Z5Y6 402 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 IRF2BP1Q8IU81 584 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 SLC41A1Q8IVJ1 513 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 MARCH10Q8NA82 808 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 ACRBPQ8NEB7 543 aa6.26□□□□□ -1.41
TRAPPC9-216ENST00000634178 WRNIP1Q96S55 665 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms