RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 PBKQ96KB5 322 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 HINFPQ9BQA5 517 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 MAF1Q9H063 256 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 GOLPH3Q9H4A6 298 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 SLC9A2Q9UBY0 812 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 HPCAL4Q9UM19 191 aa13.26□□□□□ -0.29
PHACTR4-206ENST00000632421 MYPNQ86TC9 1320 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 DENND3A2RUS2 1198 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 GOLGA8IPA6NC78 632 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 GOLGA8JA6NMD2 632 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 ADRB2P07550 413 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 TMEM253P0C7T8 217 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 MXI1P50539 228 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 SP4Q02446 784 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 ARHGEF19Q8IW93 802 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 MED4Q9NPJ6 270 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 NCANO14594 1321 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 TMCO5BA8MYB1 307 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 ANKRD63C9JTQ0 380 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 PMM2O15305 246 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 STBD1O95210 358 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 ADSSP30520 456 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 SNRNP35Q16560 246 aaKnown RBP13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 PEX26Q7Z412 305 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 SLFN11Q7Z7L1 901 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 FAM71BQ8TC56 605 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 CTNNBL1Q8WYA6 563 aaPredicted RBP13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 BSNDQ8WZ55 320 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 GDAP1L1Q96MZ0 367 aa13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 NTPCRQ9BSD7 190 aaKnown RBP13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 SEPT11Q9NVA2 429 aaKnown RBP13.25□□□□□ -0.29
PHACTR4-206ENST00000632421 AARSP49588 968 aaKnown RBP eCLIP13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 ACTR2P61160 394 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 PRKG1Q13976 671 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 DAAM2Q86T65 1068 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 CBWD2Q8IUF1 395 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 GPC2Q8N158 579 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 USP38Q8NB14 1042 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 MCPH1Q8NEM0 835 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 RFFLQ8WZ73 363 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 TMEM117Q9H0C3 514 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 SPATA31C2B4DYI2 1134 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 DGAT1O75907 488 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 TNFRSF8P28908 595 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 CNGA1P29973 690 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 HIRAP54198 1017 aaPredicted RBP13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 PRKCEQ02156 737 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 CCDC60Q8IWA6 550 aaPredicted RBP13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 SAAL1Q96ER3 474 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 AGPAT1Q99943 283 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 VPS18Q9P253 973 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 ANKRD65E5RJM6 399 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 SOX10P56693 466 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 MCCD1P59942 119 aaPredicted RBP13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 RNASE9P60153 205 aaKnown RBP13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 MIS18BP1Q6P0N0 1132 aa13.24□□□□□ -0.29
PHACTR4-206ENST00000632421 ABCB4P21439 1286 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 TNNC1P63316 161 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 PTPROQ16827 1216 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 SH3D19Q5HYK7 790 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 ABHD15Q6UXT9 468 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 SLC35G2Q8TBE7 412 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 KRT12Q99456 494 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 CYP26B1Q9NR63 512 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 USP20Q9Y2K6 914 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 TELO2Q9Y4R8 837 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 WDR90Q96KV7 1748 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 CEP104O60308 925 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 EPHB4P54760 987 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 IFT20Q8IY31 132 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 ACTRT1Q8TDG2 376 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 ATP6V0A4Q9HBG4 840 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 PDLIM7Q9NR12 457 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 ADAM21Q9UKJ8 722 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 STXBP5LQ9Y2K9 1186 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 FAN1Q9Y2M0 1017 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 PFASO15067 1338 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 LCTP09848 1927 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 LOC285556D6RIA3 1793 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 TULP1O00294 542 aaPredicted RBP13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 SORBS3O60504 671 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 RTP1P59025 263 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 MAP2K1Q02750 393 aaPredicted RBP13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 SND1Q7KZF4 910 aaKnown RBP eCLIP13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 NT5DC3Q86UY8 548 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 CHST13Q8NET6 341 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 SLC20A1Q8WUM9 679 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 CCDC127Q96BQ5 260 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 OSGEPQ9NPF4 335 aa13.23□□□□□ -0.29
PHACTR4-206ENST00000632421 POLR2AP24928 1970 aaKnown RBP13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 ANKRD62A6NC57 917 aa13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 USP2O75604 605 aaPredicted RBP13.22□□□□□ -0.29
PHACTR4-206ENST00000632421 HEXIM1O94992 359 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms