RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 CWH43Q9H720 699 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 PIN4Q9Y237 131 aaKnown RBP12.31□□□□□ -0.44
DDX41-219ENST00000629036 MTCH2Q9Y6C9 303 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 VWA8A3KMH1 1905 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 B4GALT3O60512 393 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 ARF4P18085 180 aaPredicted RBP12.3□□□□□ -0.44
DDX41-219ENST00000629036 NAMPTP43490 491 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 CEBPZQ03701 1054 aaKnown RBP12.3□□□□□ -0.44
DDX41-219ENST00000629036 CAMK1Q14012 370 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 PCBP1Q15365 356 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDX41-219ENST00000629036 AXDND1Q5T1B0 1012 aaPredicted RBP12.3□□□□□ -0.44
DDX41-219ENST00000629036 FOXD4L5Q5VV16 416 aaPredicted RBP12.3□□□□□ -0.44
DDX41-219ENST00000629036 MRPL10Q7Z7H8 261 aaKnown RBP12.3□□□□□ -0.44
DDX41-219ENST00000629036 TMEM192Q8IY95 271 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 SMG8Q8ND04 991 aaKnown RBP12.3□□□□□ -0.44
DDX41-219ENST00000629036 FOXD4L4Q8WXT5 416 aaPredicted RBP12.3□□□□□ -0.44
DDX41-219ENST00000629036 KCNN1Q92952 543 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 EIF2AQ9BY44 585 aaKnown RBP12.3□□□□□ -0.44
DDX41-219ENST00000629036 INO80BQ9C086 356 aaPredicted RBP12.3□□□□□ -0.44
DDX41-219ENST00000629036 NT5C3AQ9H0P0 336 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 FAM105AQ9NUU6 356 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 MTUS1Q9ULD2 1270 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 DNM3Q9UQ16 869 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 CNTNAP2Q9UHC6 1331 aa12.3□□□□□ -0.44
DDX41-219ENST00000629036 NPHP3-ACAD11A0A0J9YXS1 232 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 H3BNC9 293 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 INPPL1O15357 1258 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 HIP1RO75146 1068 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 YEATS4O95619 227 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 PLA2G4BP0C869 781 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 STAG3L1P0CL83 205 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 AFF1P51825 1210 aaKnown RBP12.29□□□□□ -0.44
DDX41-219ENST00000629036 TFDP1Q14186 410 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 BTG3Q14201 252 aaPredicted RBP12.29□□□□□ -0.44
DDX41-219ENST00000629036 PAN2Q504Q3 1202 aaKnown RBP12.29□□□□□ -0.44
DDX41-219ENST00000629036 AGMOQ6ZNB7 445 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 FIBCD1Q8N539 461 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 RAD54LQ92698 747 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 KIFAP3Q92845 792 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 LPPQ93052 612 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 CPB2Q96IY4 423 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 CCDC43Q96MW1 224 aaKnown RBP12.29□□□□□ -0.44
DDX41-219ENST00000629036 SAMD11Q96NU1 681 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 FIZ1Q96SL8 496 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 TMEM117Q9H0C3 514 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 DACT1Q9NYF0 836 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 ARHGAP28Q9P2N2 729 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
DDX41-219ENST00000629036 USP20Q9Y2K6 914 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 PCDHB7Q9Y5E2 793 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 TRIOO75962 3097 aa12.29□□□□□ -0.44
DDX41-219ENST00000629036 A0A1B0GUA9 196 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 LRRIQ4A6NIV6 560 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 INO80B-WBP1J3KQ70 363 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 ABLIM1O14639 778 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
DDX41-219ENST00000629036 PPP6R2O75170 966 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 EOMESO95936 686 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 PDIA4P13667 645 aaKnown RBP12.28□□□□□ -0.44
DDX41-219ENST00000629036 ZSCAN20P17040 1043 aaPredicted RBP12.28□□□□□ -0.44
DDX41-219ENST00000629036 DNAJB1P25685 340 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 BMPR1AP36894 532 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 NPTX2P47972 431 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 ZNF131P52739 623 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 E2F4Q16254 413 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 TWF2Q6IBS0 349 aaKnown RBP12.28□□□□□ -0.44
DDX41-219ENST00000629036 KRI1Q8N9T8 703 aaKnown RBP12.28□□□□□ -0.44
DDX41-219ENST00000629036 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 CCDC51Q96ER9 411 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 PDZD7Q9H5P4 517 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 CD320Q9NPF0 282 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 PCDHB2Q9Y5E7 798 aa12.28□□□□□ -0.44
DDX41-219ENST00000629036 TBKBP1A7MCY6 615 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 SPTLC2O15270 562 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 GRM6O15303 877 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 NCLP19338 710 aaKnown RBP12.27□□□□□ -0.45
DDX41-219ENST00000629036 AXLP30530 894 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 CTNNB1P35222 781 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 UBA7P41226 1012 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 RAB27AP51159 221 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 DNM1Q05193 864 aaKnown RBP12.27□□□□□ -0.45
DDX41-219ENST00000629036 MCM6Q14566 821 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 COL19A1Q14993 1142 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 ZRSR1Q15695 479 aaKnown RBP12.27□□□□□ -0.45
DDX41-219ENST00000629036 NT5DC1Q5TFE4 455 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 EEF1DP3Q658K8 133 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 SHC4Q6S5L8 630 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 CDR2LQ86X02 465 aaPredicted RBP12.27□□□□□ -0.45
DDX41-219ENST00000629036 GSTCDQ8NEC7 633 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 HELQQ8TDG4 1101 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 PRIMPOLQ96LW4 560 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 REEP2Q9BRK0 252 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 NTPCRQ9BSD7 190 aaKnown RBP12.27□□□□□ -0.45
DDX41-219ENST00000629036 TIPINQ9BVW5 301 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 RNF39Q9H2S5 420 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 NXF3Q9H4D5 531 aaKnown RBP12.27□□□□□ -0.45
DDX41-219ENST00000629036 TYW1Q9NV66 732 aaKnown RBP12.27□□□□□ -0.45
DDX41-219ENST00000629036 KCND2Q9NZV8 630 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 IPPQ9Y573 584 aa12.27□□□□□ -0.45
DDX41-219ENST00000629036 PHLPP2Q6ZVD8 1323 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms