RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 FOXN1O15353 648 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 DNAJC8O75937 253 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 SKIP12755 728 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 NR1H3Q13133 447 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 HEATR6Q6AI08 1181 aaKnown RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 TBC1D1Q86TI0 1168 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 ALDH8A1Q9H2A2 487 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 ANLNQ9NQW6 1124 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 EMSYQ7Z589 1322 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 A8MXQ7 604 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 EPHA7Q15375 998 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 HIPK4Q8NE63 616 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 OSBPL5Q9H0X9 879 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 AGO2Q9UKV8 859 aaKnown RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 PREX2Q70Z35 1606 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 NME3Q13232 169 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 C12orf60Q5U649 245 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 HAUS6Q7Z4H7 955 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 GSPT2Q8IYD1 628 aaKnown RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 ACAP3Q96P50 834 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 DDX47Q9H0S4 455 aaKnown RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 SLC9A2Q9UBY0 812 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 GYS2P54840 703 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 COPS2P61201 443 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
SCN8A-209ENST00000627620 ENOSF1Q7L5Y1 443 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 GLYCTKQ8IVS8 523 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 TTC39CQ8N584 583 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 SRBD1Q8N5C6 995 aaKnown RBP13.62□□□□□ -0.23
SCN8A-209ENST00000627620 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 TRIM15Q9C019 465 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 GTSE1Q9NYZ3 720 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 TNS3Q68CZ2 1445 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 GUCY1A2P33402 732 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 EFHC2Q5JST6 749 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 ZBTB41Q5SVQ8 909 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 DHX40Q8IX18 779 aaKnown RBP13.62□□□□□ -0.23
SCN8A-209ENST00000627620 PPM1NQ8N819 430 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 MMTAG2Q9BU76 263 aaKnown RBP13.62□□□□□ -0.23
SCN8A-209ENST00000627620 MAGEB5Q9BZ81 275 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 SCOCQ9UIL1 159 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 SMARCA1P28370 1054 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 CHRNA3P32297 505 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 BCAR1P56945 870 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 GPS1Q13098 491 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 ADGRG1Q9Y653 693 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 GRID2IPA4D2P6 1211 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 GGCXP38435 758 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 MDM2Q00987 491 aaPredicted RBP13.62□□□□□ -0.23
SCN8A-209ENST00000627620 DMTNQ08495 405 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 AP1B1Q10567 949 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 GRAMD1BQ3KR37 738 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 CCDC144BQ3MJ40 725 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 FAM102AQ5T9C2 384 aaPredicted RBP13.62□□□□□ -0.23
SCN8A-209ENST00000627620 RHOT1Q8IXI2 618 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 CYTH2Q99418 400 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 EYA4O95677 639 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 NCLNQ969V3 563 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 WNT8AQ9H1J5 351 aa13.62□□□□□ -0.23
SCN8A-209ENST00000627620 DDX56Q9NY93 547 aaKnown RBP13.62□□□□□ -0.23
SCN8A-209ENST00000627620 ESYT3A0FGR9 886 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 MOCS2O96007 188 aaPredicted RBP13.61□□□□□ -0.23
SCN8A-209ENST00000627620 HMGCS2P54868 508 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 MAGOHP61326 146 aaKnown RBP13.61□□□□□ -0.23
SCN8A-209ENST00000627620 TRIM72Q6ZMU5 477 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 ACAD11Q709F0 780 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 ATG9AQ7Z3C6 839 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 SNX19Q92543 992 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
SCN8A-209ENST00000627620 KIF12Q96FN5 646 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 HDAC6Q9UBN7 1215 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 KITP10721 976 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 AP3M2P53677 418 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 ROR1Q01973 937 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 DUOXA2Q1HG44 320 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 CEP55Q53EZ4 464 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 FSCBQ5H9T9 825 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 TTC8Q8TAM2 541 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 MORC4Q8TE76 937 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 DHX35Q9H5Z1 703 aaKnown RBP13.61□□□□□ -0.23
SCN8A-209ENST00000627620 TADA3O75528 432 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 KRT14P02533 472 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 YWHABP31946 246 aaKnown RBP13.61□□□□□ -0.23
SCN8A-209ENST00000627620 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 RMDN2Q96LZ7 410 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 TMEM60Q9H2L4 133 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 PDIA2Q13087 525 aaKnown RBP13.61□□□□□ -0.23
SCN8A-209ENST00000627620 SEMA3FQ13275 785 aa13.61□□□□□ -0.23
SCN8A-209ENST00000627620 ASB14A6NK59 587 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 NEMP1O14524 444 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 DPYSL4O14531 572 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 GYG2O15488 501 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 CC2D1AQ6P1N0 951 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 PDXDC1Q6P996 788 aa13.6□□□□□ -0.23
SCN8A-209ENST00000627620 SUDS3Q9H7L9 328 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 SARS2Q9NP81 518 aaKnown RBP13.6□□□□□ -0.23
SCN8A-209ENST00000627620 SUGT1Q9Y2Z0 365 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms