RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 IRX2Q9BZI1 471 aaPredicted RBP17.77■□□□□ 0.43
LDB3-208ENST00000623007 C2orf40Q9H1Z8 148 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 DOCK5Q9H7D0 1870 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 K7ERI5 159 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 TADA3O75528 432 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 PLEKP08567 350 aaPredicted RBP17.76■□□□□ 0.43
LDB3-208ENST00000623007 ATP4AP20648 1035 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 LIG4P49917 911 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 CYP27A1Q02318 531 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 CCDC62Q6P9F0 684 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 ENOSF1Q7L5Y1 443 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 RABGGTAQ92696 567 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 GLG1Q92896 1179 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.76■□□□□ 0.43
LDB3-208ENST00000623007 CARD6Q9BX69 1037 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 COQ4Q9Y3A0 265 aa17.76■□□□□ 0.43
LDB3-208ENST00000623007 ZNF233A6NK53 670 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 F8VZ95 297 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 ZNF263O14978 683 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 FANCGO15287 622 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 ASAP2O43150 1006 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 RRP9O43818 475 aaKnown RBP17.75■□□□□ 0.43
LDB3-208ENST00000623007 EXTL3O43909 919 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 HBP1O60381 514 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 MAPK4P31152 587 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 NAB2Q15742 525 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 CBWD6Q4V339 395 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 CBWD3Q5JTY5 395 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 CBWD5Q5RIA9 395 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 MAP1SQ66K74 1059 aaPredicted RBP17.75■□□□□ 0.43
LDB3-208ENST00000623007 EMID1Q96A84 441 aaPredicted RBP17.75■□□□□ 0.43
LDB3-208ENST00000623007 FGD4Q96M96 766 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 SH2D3AQ9BRG2 576 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 LACRTQ9GZZ8 138 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 PCIF1Q9H4Z3 704 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 ZNF408Q9H9D4 720 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 DNAJC12Q9UKB3 198 aa17.75■□□□□ 0.43
LDB3-208ENST00000623007 PGK2P07205 417 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 TXNP10599 105 aaKnown RBP17.74■□□□□ 0.43
LDB3-208ENST00000623007 ACTN1P12814 892 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 TCP1P17987 556 aaKnown RBP17.74■□□□□ 0.43
LDB3-208ENST00000623007 GFPT1Q06210 699 aaPredicted RBP17.74■□□□□ 0.43
LDB3-208ENST00000623007 FSTL1Q12841 308 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 TFDP1Q14186 410 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 FAM110CQ1W6H9 321 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 ZNF792Q3KQV3 632 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 EPC2Q52LR7 807 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 ZPBP2Q6X784 338 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 TRMT1LQ7Z2T5 733 aaKnown RBP17.74■□□□□ 0.43
LDB3-208ENST00000623007 TRAPPC11Q7Z392 1133 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 ZBTB8OSQ8IWT0 167 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 RDH13Q8NBN7 331 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 PARD3BQ8TEW8 1205 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 BSNDQ8WZ55 320 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 SPATA33Q96N06 139 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 RNF14Q9UBS8 474 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 ZNFX1Q9P2E3 1918 aaKnown RBP17.74■□□□□ 0.43
LDB3-208ENST00000623007 A0A0A6YYK5 440 aaPredicted RBP17.74■□□□□ 0.43
LDB3-208ENST00000623007 RBM47A0AV96 593 aaKnown RBP17.74■□□□□ 0.43
LDB3-208ENST00000623007 CTAGE15A4D2H0 777 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 BTBD19C9JJ37 291 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 CTAGE8P0CG41 777 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 TRIM49P0CI25 452 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 TRIM49CP0CI26 452 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 AP3M2P53677 418 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 CHMP4BP1P59074 171 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 AMPD2Q01433 879 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 PTK2Q05397 1052 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 LY6KQ17RY6 165 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 SPRYD7Q5W111 196 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 MAMDC4Q6UXC1 1216 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 CTAGE6Q86UF2 777 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 CTAGE4Q8IX94 777 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 LMBR1Q8WVP7 490 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 PSPC1Q8WXF1 523 aaKnown RBP17.74■□□□□ 0.43
LDB3-208ENST00000623007 PCYT2Q99447 389 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 PDCL3Q9H2J4 239 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 ERAP1Q9NZ08 941 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 ADAMTS1Q9UHI8 967 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 SIP14410 1827 aa17.74■□□□□ 0.43
LDB3-208ENST00000623007 ADCY3O60266 1144 aa17.73■□□□□ 0.43
LDB3-208ENST00000623007 GH1P01241 217 aa17.73■□□□□ 0.43
LDB3-208ENST00000623007 HOXC6P09630 235 aa17.73■□□□□ 0.43
LDB3-208ENST00000623007 GLRA2P23416 452 aa17.73■□□□□ 0.43
LDB3-208ENST00000623007 YY1P25490 414 aa17.73■□□□□ 0.43
LDB3-208ENST00000623007 ADSSP30520 456 aa17.73■□□□□ 0.43
LDB3-208ENST00000623007 MFAP3P55082 362 aa17.73■□□□□ 0.43
LDB3-208ENST00000623007 CYP24A1Q07973 514 aa17.73■□□□□ 0.43
LDB3-208ENST00000623007 DRAP1Q14919 205 aaPredicted RBP17.73■□□□□ 0.43
LDB3-208ENST00000623007 ARMCX2Q7L311 632 aa17.73■□□□□ 0.43
LDB3-208ENST00000623007 COL1A2P08123 1366 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 UTRNP46939 3433 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 IGKV6-21A0A0C4DH24 114 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 MACROD2A1Z1Q3 448 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 LRRIQ4A6NIV6 560 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 CYP2C8P10632 490 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 MCM3P25205 808 aa17.72■□□□□ 0.43
LDB3-208ENST00000623007 GPC3P51654 580 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms