RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 IFNLR1Q8IU57 520 aaPredicted RBP19.53■□□□□ 0.72
PTCHD3-202ENST00000622555 THAP9Q9H5L6 903 aa19.53■□□□□ 0.72
PTCHD3-202ENST00000622555 MINDY3Q9H8M7 445 aa19.53■□□□□ 0.72
PTCHD3-202ENST00000622555 TISP43B9A030 160 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 ATP1A3P13637 1013 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 ZNF18P17022 549 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 CDK11BP21127 795 aaKnown RBP19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 NR2F2P24468 414 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 RPL13P26373 211 aaKnown RBP19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 LIG4P49917 911 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 ADAM9Q13443 819 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 CDKAL1Q5VV42 579 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 LRRC55Q6ZSA7 311 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 WNT8BQ93098 351 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 TMEM106CQ9BVX2 250 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 SEZ6LQ9BYH1 1024 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 GCOM2Q9BZD3 368 aaPredicted RBP19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 SENP6Q9GZR1 1112 aaPredicted RBP19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 CGNQ9P2M7 1197 aaKnown RBP19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 USP20Q9Y2K6 914 aa19.52■□□□□ 0.72
PTCHD3-202ENST00000622555 ANKRD63C9JTQ0 380 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 M0QZ92 97 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 CETN3O15182 167 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 CSDE1O75534 798 aaKnown RBP19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 RPLP2P05387 115 aaKnown RBP19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 MNX1P50219 401 aaPredicted RBP19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 SNRPFP62306 86 aaKnown RBP19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 MRPS6P82932 125 aaKnown RBP19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 PTK7Q13308 1070 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 SRGAP1Q7Z6B7 1085 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 CREBRFQ8IUR6 639 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 ZNF710Q8N1W2 664 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 OSMRQ99650 979 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 MRPL4Q9BYD3 311 aaKnown RBP19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 TRPV6Q9H1D0 765 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 FZD8Q9H461 694 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 CDHR5Q9HBB8 845 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 B4GALT4O60513 344 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 EDN1P05305 212 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 CYP2J2P51589 502 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 NFIL3Q16649 462 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 ARMCX5Q6P1M9 558 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 FAM114A1Q8IWE2 563 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 CEP63Q96MT8 703 aa19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 TARS2Q9BW92 718 aaKnown RBP19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 PRMT7Q9NVM4 692 aaPredicted RBP19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 MAGEC2Q9UBF1 373 aaPredicted RBP19.51■□□□□ 0.71
PTCHD3-202ENST00000622555 KCNJ18B7U540 433 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 ACKR2O00590 384 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 PIGRP01833 764 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 IQCF3P0C7M6 154 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 THPOP40225 353 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 PRPF4BQ13523 1007 aaKnown RBP19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 KCNJ12Q14500 433 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 TMEM132AQ24JP5 1023 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 SLC39A4Q6P5W5 647 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 RPAINQ86UA6 219 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 IRF2BP1Q8IU81 584 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 ZC3H3Q8IXZ2 948 aaKnown RBP19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 ANKLE1Q8NAG6 615 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 ANP32BQ92688 251 aaKnown RBP19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 CBWD1Q9BRT8 395 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 CELF4Q9BZC1 486 aaKnown RBP19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 PCIF1Q9H4Z3 704 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 BRCA2P51587 3418 aa19.5■□□□□ 0.71
PTCHD3-202ENST00000622555 CTSHP09668 335 aa19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 DARSP14868 501 aaKnown RBP19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 CDK7P50613 346 aa19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 CRYBB1P53674 252 aaPredicted RBP19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 SPAG1Q07617 926 aa19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 FAM187BQ17R55 369 aa19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 ZPBP2Q6X784 338 aa19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 DIS3LQ8TF46 1054 aaKnown RBP19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 DHX38Q92620 1227 aaKnown RBP19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 CNOT6LQ96LI5 555 aaKnown RBP19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 TRPV2Q9Y5S1 764 aa19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 CDY2AQ9Y6F7 541 aa19.49■□□□□ 0.71
PTCHD3-202ENST00000622555 TTLL13PA6NNM8 815 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 B4GALT5O43286 388 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 ERLIN2O94905 339 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 EIF4BP23588 611 aaKnown RBP19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 ADSSP30520 456 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 ATN1P54259 1190 aaPredicted RBP19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 SNX17Q15036 470 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 TCP11X2Q5H9J9 407 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 CEP135Q66GS9 1140 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 FILIP1Q7Z7B0 1213 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 SLC9A9Q8IVB4 645 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 C12orf56Q8IXR9 622 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 ANKRD20A12PQ8NF67 263 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 POMGNT1Q8WZA1 660 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 ACO2Q99798 780 aaKnown RBP19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 DMAC2Q9NW81 257 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 HSPBP1Q9NZL4 362 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 ANKFY1Q9P2R3 1169 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 EXOC3O60645 756 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 SERPINC1P01008 464 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 FGFR4P22455 802 aa19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 EEF1GP26641 437 aaKnown RBP19.48■□□□□ 0.71
PTCHD3-202ENST00000622555 MATR3P43243 847 aaKnown RBP eCLIP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms